[WIP] Make jobs prioritize processing raw data #2697
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Issue Number
AlexsLemonade/refinebio-examples#455
Purpose/Implementation Notes
We found an experiment GSE99039 that has raw data but was processed using NO_OP. This is my best guess at what the issue is, but I have neither reproduced this yet nor tested this fix.
Methods
Right now we just use the first original file passed to this function. This instead only uses that if there's no original file with raw data.
Types of changes
Functional tests
TBD
Checklist
Screenshots
Please attach any screenshots that illustrate these changes.