Feature dandi cron check #191
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| name: OpenScope Actions | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| env: # Define environment variables for the entire job | |
| DBNAME: ${{ secrets.DBNAME }} | |
| FIREBASE_CREDENTIALS: ${{ secrets.FIREBASE_CREDENTIALS }} | |
| HOST: ${{ secrets.HOST }} | |
| PASSWORD: ${{ secrets.PASSWORD }} | |
| PORT: ${{ secrets.PORT }} | |
| USER: ${{ secrets.USER }} | |
| DANDI_API_KEY: ${{ secrets.DANDI_API_KEY }} | |
| jobs: | |
| Test: | |
| name: Test | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.7.17 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.7.17 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e .[TEST] | |
| pip install pytest-cov | |
| pip install wheel | |
| pip install h5py==2.10.0 | |
| pip install allenSDK | |
| - name: Create Firebase Credentials File | |
| run: | | |
| echo "$FIREBASE_CREDENTIALS" > firebase_credentials.json | |
| # Set the path to the credentials file as an environment variable | |
| - name: Set Firebase Credentials Path as Environment Variable | |
| run: echo "FIREBASE_CREDENTIALS_PATH=$(pwd)/firebase_credentials.json" >> $GITHUB_ENV | |
| - name: Test with pytest | |
| run: pytest -vv --cov=./ --cov-report=xml | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| directory: ./ | |
| env_vars: OS,PYTHON | |
| fail_ci_if_error: true | |
| files: ./coverage.xml | |
| flags: unittests | |
| name: codecov-umbrella | |
| verbose: true | |
| Lint: | |
| name: Lint | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| - name: Install Python dependencies | |
| run: pip install flake8 | |
| - name: Run Linter | |
| uses: wearerequired/lint-action@v1 | |
| with: | |
| flake8_extensions: py | |
| flake8: true |