Error: missing fdas_test_parameters.h

[krajwade]

I am currently building the cheetah pipeline via a docker container. When compiling astro-accelerate, I used the following command:

RUN cd /software/astro-accelerate/ &&
git checkout aa_interface &&
mkdir build/ &&
cd build/ &&
cmake -DENABLE_CUDA=true ../ &&
make -j 16 &&
make install

and I am getting the following error after make install:

CMake Error at lib/cmake_install.cmake:57 (file):
file INSTALL cannot find
"/software/astro-accelerate/lib/headers/fdas_test_parameters.h".
Call Stack (most recent call first):
cmake_install.cmake:42 (include)
Makefile:61: recipe for target 'install' failed
make: *** [install] Error 1

Has anyone seen this before. I checked the aa_interface branch and there is no such header file.

[KAdamek]

Hi,
the header file 'fdas_test_parameters.h' is in master branch of AstroAccelerate and it defines some test parameters for FDAS test using accelerated sin wave. I'm not sure why it is required by aa_interface branch unless someone has updated it from master branch.

[ewanbarr]

For some reason it looks like the git checkout might not be working properly on the specific machine Kaustubh is using. I can't replicate this and I have tried it on a couple of machines with the same Dockerfile.

[krajwade]

So I have built the pipeline now. The only way to do that was to manually clone the astro-accelerate repo and then build it. If I clone through the Dockerfile, it does not work.

[ewanbarr]

This is a very strange error. I suspect it is something to do with the permissions setup on your docker which causes an issue when try to alter a previous layer in the image. Can I suggest a quick fix, put the git clone for AstroAccelerate in the same docker RUN command and delete the earlier one: RUN git clone <AstroAccelerate uri> cd /software/astro-accelerate/ && git checkout aa_interface && mkdir build/ && cd build/ && cmake -DENABLE_CUDA=true ../ && make -j 16 && make install

…

On Fri, 29 Sep 2017 at 11:31 krajwade ***@***.***> wrote: Closed #20 <#20>. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#20 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABFoTPlgNelQeTWxIRwpYZWgYtJt5lmYks5snLkKgaJpZM4PntSE> .

[krajwade]

That worked as well.