Freeze ruamel.yaml version just in case

Barski-lab · Jul 14, 2020 · 128c203 · 128c203
1 parent bfc3f8e
commit 128c203
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Showing 2 changed files with 4 additions and 2 deletions.
diff --git a/cwl_airflow/components/test/conformance.py b/cwl_airflow/components/test/conformance.py
@@ -147,10 +147,11 @@ def load_test_suite(args):
         test_data = suite_data[i]
         run_id = str(uuid.uuid4())
         tool_location = get_absolute_path(test_data["tool"], suite_dir)
+        job_location = get_absolute_path(test_data["job"], suite_dir)
         if "job" in test_data:
             job_data = load_job(
                 workflow=tool_location,
-                job=get_absolute_path(test_data["job"], suite_dir)
+                job=job_location
             )
         else:
             job_data = {}
@@ -163,7 +164,7 @@ def load_test_suite(args):
             "index": i+1,                                                     # to know test case number, 1-based to correspond to --range
             "finished": False                                                 # to indicate whether the test was finished or not
         })
-
+        logging.info(f"Load test case {i+1} to run {tool_location} with {job_location} as {run_id}")
         suite_data_filtered[run_id] = test_data                               # use "run_id" as a key for fast access when checking results
     return suite_data_filtered
 

diff --git a/setup.py b/setup.py
@@ -76,6 +76,7 @@ def get_version():
         "schema-salad==6.0.20200601095207",
         "apache-airflow==1.10.10",
         "cwltest==2.0.20200220223835",
+        "ruamel.yaml==0.16.5",
         "jsonmerge",
         "pyjwt",
         "connexion",