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@Barski-lab

Dr. Barski Laboratory

The Barski Lab researches epigenomics with a primary focus on the immune system. Our main research projects are designed to investigate epigenomic regulations

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  1. cwl-airflow cwl-airflow Public

    Python package to extend Airflow functionality with CWL1.1 support

    Python 185 32

  2. workflows workflows Public

    Forked from common-workflow-library/legacy

    Community maintained workflows & tools (with examples)

    Common Workflow Language 6 7

  3. biowardrobe biowardrobe Public archive

    BioWardrobe: an integrated platform for analysis of epigenomics and transcriptomics data

    JavaScript 5 1

  4. biowardrobe-airflow-analysis biowardrobe-airflow-analysis Public

    BioWardrobe's backend rewritten for Apache Airflow.

    TSQL 5 2

  5. sc-seq-analysis sc-seq-analysis Public

    CWL toolkit for single-cell sequencing data analysis

    Common Workflow Language 4

  6. ga4gh_challenge ga4gh_challenge Public

    Workflow for GA4GH/DREAM challenge (phase 2)

    Common Workflow Language 3 5

Repositories

Showing 10 of 31 repositories
  • workflows-datirium Public Forked from datirium/workflows

    CWL based Bioinformatics Workflows

    Barski-lab/workflows-datirium’s past year of commit activity
    Common Workflow Language 1 Apache-2.0 14 0 0 Updated Nov 4, 2024
  • workflows Public Forked from common-workflow-library/legacy

    Community maintained workflows & tools (with examples)

    Barski-lab/workflows’s past year of commit activity
    Common Workflow Language 6 62 0 0 Updated Oct 25, 2024
  • cwl-airflow Public

    Python package to extend Airflow functionality with CWL1.1 support

    Barski-lab/cwl-airflow’s past year of commit activity
    Python 185 Apache-2.0 32 14 2 Updated Oct 25, 2023
  • Lenti-STARR Public
    Barski-lab/Lenti-STARR’s past year of commit activity
    Shell 1 Apache-2.0 1 0 0 Updated Feb 21, 2023
  • biowardrobe-ng Public

    BioWardrobe-NG

    Barski-lab/biowardrobe-ng’s past year of commit activity
    CSS 2 1 0 18 Updated Dec 22, 2022
  • sc-seq-analysis Public

    CWL toolkit for single-cell sequencing data analysis

    Barski-lab/sc-seq-analysis’s past year of commit activity
    Common Workflow Language 4 Apache-2.0 0 1 0 Updated Nov 11, 2022
  • visualization_plugins Public

    Set of utilities for interactive data visualization

    Barski-lab/visualization_plugins’s past year of commit activity
    JavaScript 0 Apache-2.0 0 0 0 Updated Nov 1, 2022
  • workflows_test Public

    Conformance test for Barski-lab/workflows

    Barski-lab/workflows_test’s past year of commit activity
    AngelScript 1 0 0 0 Updated Apr 20, 2022
  • geep Public

    INPUT: sam, bam, gff, gtf, tab-delimited table annotations

    Barski-lab/geep’s past year of commit activity
    C++ 0 MIT 1 1 0 Updated Sep 14, 2020
  • biowardrobe-airflow-plugins Public

    Plugins for BioWardrobe Analysis

    Barski-lab/biowardrobe-airflow-plugins’s past year of commit activity
    TSQL 1 Apache-2.0 1 3 1 Updated Jun 3, 2020
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