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Exclude not correct tests from cwl-v1.1 test suite
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This test will fail when tools is added as the workflow step
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michael-kotliar committed Mar 17, 2021
1 parent db71e03 commit 8aa26f6
Showing 1 changed file with 15 additions and 2 deletions.
17 changes: 15 additions & 2 deletions tests/run_cwl_v1.1_tests.sh
@@ -1,6 +1,19 @@

REPO_URL="https://github.com/common-workflow-language/cwl-v1.1.git"
SUITE="conformance_tests.yaml"
RANGE="--range 2-999"

echo "Running tests for ${REPO_URL} from file ${SUITE}"
./test_conformance.sh ${REPO_URL} ${SUITE}

# SKIP test N1
# - job: tests/bwa-mem-job.json
# tool: tests/bwa-mem-tool.cwl
# BECAUSE
# In this test they create cwl.output.json that doesn’t include sam output.
# Therefore when placed as a step of the workflow the bwa-mem-tool.cwl tool
# won’t produce a required output and we will get an error "Output is missing
# expected field". This is not a bug that we should fix, as this test interfere
# the normal flow of things.


echo "Running ${RANGE} tests for ${REPO_URL} from file ${SUITE}"
./test_conformance.sh ${REPO_URL} ${SUITE} ${RANGE}

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