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93 Open 143 Closed
93 Open 143 Closed
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Issues list

A question about N_cells_per_location question Further information is requested
#383 opened Sep 13, 2024 by beilouer
A question aboyt question Further information is requested
#382 opened Sep 13, 2024 by beilouer
4 tasks
Inconsistence between N_cells_per_location and the deconvolution result question Further information is requested
#381 opened Sep 6, 2024 by thestarocean
Insight-question: Missing cell types & reliability of conditional expression-profiles question Further information is requested
#380 opened Aug 28, 2024 by floriankreten
Gene imputation question Further information is requested
#379 opened Aug 21, 2024 by wangjiawen2013
1
How to Visualization NMF coloc result? question Further information is requested
#378 opened Aug 14, 2024 by yifanfu01
Estimated cell type counts: adjusted for abundance or not? question Further information is requested
#377 opened Aug 12, 2024 by BaharehAjami
4
Using per-celltype counts for downstream analysis question Further information is requested
#376 opened Jul 30, 2024 by Dillon214
Performance issues on a large (120724) location dataset question Further information is requested
#375 opened Jul 13, 2024 by Dillon214
4
Using scATAC-seq dataset to deconvolute 10x Visium dataset question Further information is requested
#374 opened Jun 27, 2024 by Jadeapple
2
AttributeError: module 'cell2location' has no attribute 'run_c2l' bug Something isn't working
#373 opened Jun 20, 2024 by Lee-jiahao
"OutOfMemoryError: CUDA out of memory." in GPU mode question Further information is requested
#372 opened Jun 20, 2024 by asmlgkj
7
Variable N_cell_per_location Hyperparameter question Further information is requested
#370 opened Jun 11, 2024 by Kwasi-Scientist
How can I use cell2location output for downstream analysis in R Studio question Further information is requested
#369 opened Jun 3, 2024 by 532at
2
How do I find where run_colocation stores its results in adata? question Further information is requested
#368 opened Jun 3, 2024 by singhbhavya
1 of 4 tasks
an unexpected keyword argument 'summ_sc_data_args' bug Something isn't working
#367 opened Jun 3, 2024 by renyuan1988
2
"OutOfMemoryError: CUDA out of memory." in CPU mode? bug Something isn't working
#366 opened May 29, 2024 by Li-ZhiD
1
ELBO loss plot was empty bug Something isn't working
#361 opened May 5, 2024 by Donbbit
Regarding memory required for the first tutorial of cell2location question Further information is requested
#360 opened May 3, 2024 by sudeepthi5
2 of 4 tasks
2
InvalidIndexError: Reindexing only valid with uniquely valued Index objects question Further information is requested
#359 opened Apr 22, 2024 by xiang11bei
1
Cell2Location on large datasets enhancement New feature or request
#356 opened Mar 19, 2024 by LinearParadox
6
cell2location installation on a Windows machine with GPU usage question Further information is requested
#355 opened Mar 9, 2024 by hkeremcil
Installing Conda environment for A100 GPUs issue question Further information is requested
#354 opened Mar 9, 2024 by Nasrine26
3 tasks done
1
Inconsistent cell type propotion between deconvoluted Visium and paired 10X Chromium question Further information is requested
#352 opened Feb 26, 2024 by kuang-da
4
Make a new cell2location pip release bug Something isn't working
#350 opened Feb 22, 2024 by vitkl
ProTip! Exclude everything labeled bug with -label:bug.