Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Improve heuristics of translating ambiguous nucs #280

Merged
merged 1 commit into from
Sep 26, 2023

Conversation

jakobnissen
Copy link
Member

Use a more principled approach, such that we now guarantee that ambiguous DNA
and RNA is translated to exactly the set of amino acids the genetic code
corresponds to.

Use a more principled approach, such that we now guarantee that ambiguous DNA
and RNA is translated to exactly the set of amino acids the genetic code
corresponds to.
@codecov
Copy link

codecov bot commented Jul 22, 2023

Codecov Report

Patch coverage: 87.50% and project coverage change: -0.47 ⚠️

Comparison is base (1ccb602) 91.21% compared to head (d5f81d6) 90.75%.

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #280      +/-   ##
==========================================
- Coverage   91.21%   90.75%   -0.47%     
==========================================
  Files          31       31              
  Lines        2403     2401       -2     
==========================================
- Hits         2192     2179      -13     
- Misses        211      222      +11     
Flag Coverage Δ
unittests 90.75% <87.50%> (-0.47%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/geneticcode.jl 80.53% <87.50%> (-6.32%) ⬇️

... and 3 files with indirect coverage changes

☔ View full report in Codecov by Sentry.
📢 Do you have feedback about the report comment? Let us know in this issue.

@jakobnissen jakobnissen merged commit 4839f27 into BioJulia:master Sep 26, 2023
24 of 28 checks passed
@jakobnissen jakobnissen deleted the trans_heur branch September 26, 2023 11:25
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant