This repository has been archived by the owner on Jul 8, 2022. It is now read-only.
0.4.0
- #23
Add resolution parameter in voxelize_batch script.
Fix naming (zero-pad) when generating a series of volumes. - #12
Fix progress report to include of all threads - #21
New voxelize_batch.py script to generate volumes on cluster nodes. - #10
voxelize: Limit volume to area covered by events. - #10
Rescale to the output type range for integer volumes. - #9
Add testLoader for validation purposes. - #4
Add LFP functor from separate repo. Move all the voltage-specific logic to
the FieldFunctor, so CompartmentLoader can be used with other type of reports
(e.g. currents in LFP).
Add radius attribute in Event, used in the CompartmentLoader.
Adapt tests and default values to latest TestData (370ebee). - #7:
Add data decomposition in voxelize tool. - 20437
Expose the VSD projection attenuation coefficient (absorption + scattering)
in the voxelize command line tool. - 20428
Fix several bugs in the VSD loader, which crashed the application when
loading events.
Update the reference BlueConfigVSD to point to existing data. - 20308
Use a custom type for the output volume in the voxelize tool. - 20241
Add --projection option in voxelize tool. When enabled, generate a 2D
projection of the resulting volume, emulating the output of a VSD imaging
process. It uses the newly added ITK projection filter
BeerLambertProjectionImageFilter. - 19753
Fix [ISC-139]. Make sure the requested end time is inside the available time
range when streaming spikes. - 19713
Add optional progress bar display if showProgress=1 in URI query. - 19230
Add support for volume time series generation for voxelize tool. - 19188
Bug fixes in compartment report indexing in compartment and VSD loaders. - 19077
Dt defaults to experiment/report dt, duration to 10.