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remove redundant commented code
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rob-p committed Jun 5, 2015
1 parent d1a3183 commit 365e2bf
Showing 1 changed file with 0 additions and 8 deletions.
8 changes: 0 additions & 8 deletions src/SalmonQuantify.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -2935,14 +2935,6 @@ int salmonQuantify(int argc, char *argv[]) {
("noFragStartPosDist", po::bool_switch(&(sopt.noFragStartPosDist))->default_value(false), "[Currently Experimental] : "
"Don't consider / model non-uniformity in the fragment start positions "
"across the transcript.")
/*
// Don't expose this yet
("noRichEqClasses", po::bool_switch(&(sopt.noRichEqClasses))->default_value(false),
"Disable \"rich\" equivalent classes. If this flag is passed, then "
"all information about the relative weights for each transcript in the "
"label of an equivalence class will be ignored, and only the relative "
"abundance and effective length of each transcript will be considered.")
*/
//("noSeqBiasModel", po::bool_switch(&(sopt.noSeqBiasModel))->default_value(false),
// "Don't learn and apply a model of sequence-specific bias")
("numAuxModelSamples", po::value<uint32_t>(&(sopt.numBurninFrags))->default_value(5000000), "The first <numAuxModelSamples> are used to train the "
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