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changing 724 to 737
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k3yavi committed Jul 8, 2021
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Expand Up @@ -82,9 +82,9 @@ values here can speed up the run substantially. In our testing we found that usu

This is an optional argument, where user can explicitly specify the whitelist CB to use for cell detection and CB sequence correction. If not given, alevin generates its own set of putative CBs.

.. note:: Not 10x 724k whitelist
.. note:: Not 10x 737k whitelist

This flag does not use the biologically known whitelist provided by 10x, instead it's per experiment level whitelist file e.g. the file generated by cellranger with the name `barcodes.tsv`.
This flag does not use the technologically defined whitelisted cellular barcodes provided by 10x, instead it's a per experiment level list of subsampled cellular barcodes that need to quantified for consistency with other tools for example an input would be a file generated by cellranger with the name `barcodes.tsv` (uncompressed).

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``--noQuant``
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