chagne default again

COMBINE-lab · Jul 4, 2020 · bfc1a4a · bfc1a4a
1 parent 5b6b7b4
commit bfc1a4a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/include/SalmonDefaults.hpp b/include/SalmonDefaults.hpp
@@ -30,7 +30,7 @@ namespace defaults {
   constexpr const double scoreExp{1.0};
   constexpr const int16_t matchScore{2};
   constexpr const int16_t mismatchPenalty{-4};
-  constexpr const int16_t gapOpenPenalty{8};
+  constexpr const int16_t gapOpenPenalty{6};
   constexpr const int16_t gapExtendPenalty{2};
   constexpr const int32_t dpBandwidth{15};
   constexpr const uint32_t mismatchSeedSkip{3};