Hi 👋 thanks for visiting the BDC github account. This account is used by members of the Barbara Davis Diabetes Center at the University of Colorado Anschutz Medical Campus. This repository contains code associated with the papers published by faculy and trainees at the BDC. We also have general resources, like pipelines, tutorials, and packages that can be used by the greater community. All of the resources are under active development. Feel free to browse and reach out to Kristen (kristen.wells-wrasman [at] cuanschutz.edu) if you have any questions or concerns.
University of Colorado Barbara Davis Center
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- scAnalysisR Public
A package to analyze single cell data in R. This package is under active development.
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- snakemake_pipelines Public
A collection of snakemake pipelines to analyze various data types. This is under active development.
- RBFOX2_project Public
Analysis pipeline and original code for RBFOX2 project - RNA-Seq and eCLIP-Seq.
- Smith_210825_b_cell_analysis Public
Analysis of human B cells for Mia Smith, Catherine Nicolas, and Zach Stensland
- Smith2022-CyTOF-analysis-CytoTree Public
Script used for analyzing mass cytometry data using CytoTree (https://github.com/JhuangLab/CytoTree)
- benniger_tf_regulators Public Forked from kwells4/benniger_tf_regulators
Analysis to accompany "Dynamic changes in β-cell [Ca 2+ ] regulates NFAT activation, gene transcription and islet gap junction communication" published in Molecular Metabolism
