fix #169

CancerRxGene · Jul 7, 2017 · 7aea7e0 · 7aea7e0
1 parent 5a485f8
commit 7aea7e0
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diff --git a/doc/ChangeLog.rst b/doc/ChangeLog.rst
@@ -3,6 +3,13 @@ ChangeLog
 
 .. contents::
 
+Version 0.20.1
+-------------------
+
+- BUGS:
+
+   - fix https://github.com/CancerRxGene/gdsctools/issues/169
+
 Version 0.20.0
 -------------------
 

diff --git a/gdsctools/omnibem.py b/gdsctools/omnibem.py
@@ -186,7 +186,7 @@ def filter_by_gene_list(self, genes, minimum_gene=3):
 
         # keep only gene in the selection
         self.unified = self.unified.query("GENE in @self.selection.index")
-        #self._update_unified()
+        self._update_unified()
 
     def filter_by_tissue_list(self, tissue_list):
         """Filter the data by tissue

diff --git a/test/gdsctools/test_omnibem.py b/test/gdsctools/test_omnibem.py
@@ -10,7 +10,8 @@ def test_omnibem():
     assert len(ob) ==  56943
     ob.filter_by_gene_list(omnibem_genes)
     mobem = ob.get_mobem()
-    assert mobem[mobem.columns[3:]].sum().sum() == 54061
+    #assert mobem[mobem.columns[3:]].sum().sum() == 54061
+    assert mobem[mobem.columns[3:]].sum().sum() == 4943
 
     #
     ob.plot_number_alteration_by_tissue()