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Hi there

  • 🔭 I’m currently actively working on Sequana and also maintaining BioServices, Damona, Fitter, colormap, spectrum, Bioconvert and easydev.
  • I'm currently leading the bioinformatics and data management activities of the Biomics NGS platform ( building pipelines and tools for production.
  • 👯 I’m looking to collaborate on BioConvert, BioServices and Damona and of course Sequana. Would you be interested to take the lead on Spectrum, fitter, colormap, please let me know.


  1. spectrum Public

    Spectral Analysis in Python

    Python 271 79

  2. bioservices Public

    Access to Biological Web Services from Python.

    Python 221 61

  3. Sequana: a set of Snakemake NGS pipelines

    Jupyter Notebook 115 26

  4. fitter Public

    Fit data to many distributions

    Python 244 40

  5. colormap Public

    Utilities to visualise and create matplotlib colormaps and various color codecs

    Jupyter Notebook 28 5

  6. Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

    Python 147 30

1,855 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri
Activity overview
Contributed to sequana/sequana, cokelaer/damona, cokelaer/bioservices and 59 other repositories

Contribution activity

October 2022

Reviewed 1 pull request in 1 repository
cokelaer/bioservices 1 pull request
9 contributions in private repositories Oct 3 – Oct 7

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