Nextflow workflow to perform HLA typing from RNAseq data (arcasHLA)
- samplesheet: Path to a CSV with columns for sample, fastq_1, and fastq_2
- genomeDir: Path to a folder containing the STAR index for chr6
- outdir: Output folder path
-
Notifications
You must be signed in to change notification settings - Fork 0
CirroBio/nf-arcashla
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
About
Nextflow workflow to perform HLA typing from RNAseq data (arcasHLA)
Resources
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published