Release 2.1.9

Close files (#71)

• Safely read logos

• Safely read config

• Restore docstring

fusion-report:2.1.5

Fixed

• many fixes done by @rannick PR #47

fusion-report:2.1.4

Fixed

• Using header columns to extract values from the fusion outputs

fusion-report:2.1.3

Fixed

• Missing escaping when saving a fusion page (#34)

fusion-report:2.1.2

Added

• New parameter --allow-multiple-gene-symbols, by default False

Fixed

• Case when fusion gene symbol can't be uniquely determined and multiple fusion options are provided (#30)

Changed

• renamed tool_cutoff to tool-cutoff

fusion-report:2.1.1

Changed

• moved databases from GitHub to Sourceforge

fusion-report:2.1.0

Added

• sync option for downloading all databases

Changed

• all databases except COSMIC are now versioned in fusion-report-db

Fixed

• Issues with downloading too many stuff (#28)

fusion-report:2.0.2

Changed

• moved from Travis to Github Actions

FIX

• tool_cutoff was not casted to int (#25)
• csv export missing data (#26)
• better exception handling for downloading databases

fusion-report:2.0.1

Quick FIX of version 2.0. FusionGDB database was not loading correctly.

FIX

• Fixed missing Mitelman database file

fusion-report:2.0

This version of fusion-report has been completely rebuild from scratch following
best python practices as well as typing.

Added

• Implemented Illumina Dragon by @chadisaad
• Implemented Arriba (#4)
• Export fusion list into multiple formats (#16)
• Version parameter (#10)

Changed

• Switched docs to docsify
• Slack invite link (#20)
• Renamed fusion_genes_mqc.json to fusions_mqc.json (#9)

Fixed

• Check if input file exists and is not empty (#13)