feat: add scipy Optimizer adapter (#231)

* move parameter flattening code into separate private submodule * add test for scipy Optimizer * make scipy and optional dependency
ComPWA · Mar 17, 2021 · 7ad175f · 7ad175f
1 parent 96cb06f
commit 7ad175f
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Showing 23 changed files with 302 additions and 105 deletions.
diff --git a/docs/conf.py b/docs/conf.py
@@ -147,6 +147,7 @@
     "pwa": ("https://pwa.readthedocs.io", None),
     "pycompwa": ("https://compwa.github.io", None),
     "python": ("https://docs.python.org/3", None),
+    "scipy": ("https://docs.scipy.org/doc/scipy/reference/", None),
     "sympy": ("https://docs.sympy.org/latest", None),
     "tensorflow": (
         "https://www.tensorflow.org/api_docs/python",

diff --git a/reqs/3.6/requirements-dev.txt b/reqs/3.6/requirements-dev.txt
@@ -6,7 +6,6 @@
 #
 absl-py==0.12.0
 alabaster==0.7.12
-amplitf==0.0.1a2
 anyio==2.2.0
 apipkg==1.5
 appdirs==1.4.4
@@ -53,7 +52,7 @@ gast==0.3.3
 gitdb==4.0.5
 gitpython==3.1.14
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 graphviz==0.16
@@ -81,7 +80,7 @@ json5==0.9.5
 jsonschema==3.2.0
 jupyter-cache==0.4.2
 jupyter-client==6.1.12
-jupyter-console==6.2.0
+jupyter-console==6.3.0
 jupyter-core==4.7.1
 jupyter-packaging==0.7.12
 jupyter-server==1.4.1
@@ -102,7 +101,7 @@ markdown==3.3.4
 markupsafe==1.1.1
 matplotlib==3.3.4
 mccabe==0.6.1
-mdit-py-plugins==0.2.5
+mdit-py-plugins==0.2.6
 mistune==0.8.4
 mpmath==1.2.1
 mypy-extensions==0.4.3
@@ -166,7 +165,7 @@ pytoml==0.1.21
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
-qtconsole==5.0.2
+qtconsole==5.0.3
 qtpy==1.9.0
 regex==2020.11.13
 requests-oauthlib==1.3.0
@@ -213,7 +212,7 @@ traitlets==4.3.3
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 urllib3==1.26.4
-virtualenv==20.4.2
+virtualenv==20.4.3
 wcwidth==0.2.5
 webencodings==0.5.1
 werkzeug==1.0.1

diff --git a/reqs/3.6/requirements-doc.txt b/reqs/3.6/requirements-doc.txt
@@ -6,7 +6,6 @@
 #
 absl-py==0.12.0
 alabaster==0.7.12
-amplitf==0.0.1a2
 argon2-cffi==20.1.0
 astunparse==1.6.3
 async-generator==1.10
@@ -35,7 +34,7 @@ gast==0.3.3
 gitdb==4.0.5
 gitpython==3.1.14
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 graphviz==0.16
 grpcio==1.32.0
@@ -57,7 +56,7 @@ jinja2==2.11.3
 jsonschema==3.2.0
 jupyter-cache==0.4.2
 jupyter-client==6.1.12
-jupyter-console==6.2.0
+jupyter-console==6.3.0
 jupyter-core==4.7.1
 jupyter-sphinx==0.3.1
 jupyter==1.0.0
@@ -68,7 +67,7 @@ markdown-it-py==0.6.2
 markdown==3.3.4
 markupsafe==1.1.1
 matplotlib==3.3.4
-mdit-py-plugins==0.2.5
+mdit-py-plugins==0.2.6
 mistune==0.8.4
 mpmath==1.2.1
 myst-nb==0.12.0
@@ -107,7 +106,7 @@ python-dateutil==2.8.1
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
-qtconsole==5.0.2
+qtconsole==5.0.3
 qtpy==1.9.0
 requests-oauthlib==1.3.0
 requests==2.25.1

diff --git a/reqs/3.6/requirements-sty.txt b/reqs/3.6/requirements-sty.txt
@@ -5,7 +5,6 @@
 #    pip-compile --no-annotate --output-file=reqs/3.6/requirements-sty.txt reqs/3.6/requirements-sty.in
 #
 absl-py==0.12.0
-amplitf==0.0.1a2
 apipkg==1.5
 appdirs==1.4.4
 astroid==2.5.1
@@ -37,7 +36,7 @@ flake8==3.9.0
 flatbuffers==1.12
 gast==0.3.3
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 grpcio==1.32.0
@@ -122,7 +121,7 @@ traitlets==4.3.3
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 urllib3==1.26.4
-virtualenv==20.4.2
+virtualenv==20.4.3
 werkzeug==1.0.1
 wheel==0.36.2
 wrapt==1.12.1

diff --git a/reqs/3.6/requirements-test.txt b/reqs/3.6/requirements-test.txt
@@ -5,7 +5,6 @@
 #    pip-compile --no-annotate --output-file=reqs/3.6/requirements-test.txt reqs/3.6/requirements-test.in
 #
 absl-py==0.12.0
-amplitf==0.0.1a2
 apipkg==1.5
 astunparse==1.6.3
 attrs==20.3.0
@@ -22,7 +21,7 @@ expertsystem==0.7.0
 flatbuffers==1.12
 gast==0.3.3
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 grpcio==1.32.0

diff --git a/reqs/3.6/requirements.txt b/reqs/3.6/requirements.txt
@@ -5,7 +5,6 @@
 #    pip-compile --no-annotate --output-file=reqs/3.6/requirements.txt reqs/3.6/requirements.in
 #
 absl-py==0.12.0
-amplitf==0.0.1a2
 astunparse==1.6.3
 attrs==20.3.0
 cachetools==4.2.1
@@ -18,7 +17,7 @@ expertsystem==0.7.0
 flatbuffers==1.12
 gast==0.3.3
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 grpcio==1.32.0
 h5py==2.10.0

diff --git a/reqs/3.7/requirements-dev.txt b/reqs/3.7/requirements-dev.txt
@@ -6,7 +6,6 @@
 #
 absl-py==0.12.0
 alabaster==0.7.12
-amplitf==0.0.1a2
 anyio==2.2.0
 apipkg==1.5
 appdirs==1.4.4
@@ -51,7 +50,7 @@ gast==0.3.3
 gitdb==4.0.5
 gitpython==3.1.14
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 graphviz==0.16
@@ -77,7 +76,7 @@ json5==0.9.5
 jsonschema==3.2.0
 jupyter-cache==0.4.2
 jupyter-client==6.1.12
-jupyter-console==6.2.0
+jupyter-console==6.3.0
 jupyter-core==4.7.1
 jupyter-packaging==0.7.12
 jupyter-server==1.4.1
@@ -98,7 +97,7 @@ markdown==3.3.4
 markupsafe==1.1.1
 matplotlib==3.3.4
 mccabe==0.6.1
-mdit-py-plugins==0.2.5
+mdit-py-plugins==0.2.6
 mistune==0.8.4
 mpmath==1.2.1
 mypy-extensions==0.4.3
@@ -162,7 +161,7 @@ pytoml==0.1.21
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
-qtconsole==5.0.2
+qtconsole==5.0.3
 qtpy==1.9.0
 regex==2020.11.13
 requests-oauthlib==1.3.0
@@ -209,7 +208,7 @@ traitlets==5.0.5
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 urllib3==1.26.4
-virtualenv==20.4.2
+virtualenv==20.4.3
 wcwidth==0.2.5
 webencodings==0.5.1
 werkzeug==1.0.1

diff --git a/reqs/3.7/requirements-doc.txt b/reqs/3.7/requirements-doc.txt
@@ -6,7 +6,6 @@
 #
 absl-py==0.12.0
 alabaster==0.7.12
-amplitf==0.0.1a2
 argon2-cffi==20.1.0
 astunparse==1.6.3
 async-generator==1.10
@@ -35,7 +34,7 @@ gast==0.3.3
 gitdb==4.0.5
 gitpython==3.1.14
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 graphviz==0.16
 grpcio==1.32.0
@@ -56,7 +55,7 @@ jinja2==2.11.3
 jsonschema==3.2.0
 jupyter-cache==0.4.2
 jupyter-client==6.1.12
-jupyter-console==6.2.0
+jupyter-console==6.3.0
 jupyter-core==4.7.1
 jupyter-sphinx==0.3.1
 jupyter==1.0.0
@@ -67,7 +66,7 @@ markdown-it-py==0.6.2
 markdown==3.3.4
 markupsafe==1.1.1
 matplotlib==3.3.4
-mdit-py-plugins==0.2.5
+mdit-py-plugins==0.2.6
 mistune==0.8.4
 mpmath==1.2.1
 myst-nb==0.12.0
@@ -106,7 +105,7 @@ python-dateutil==2.8.1
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
-qtconsole==5.0.2
+qtconsole==5.0.3
 qtpy==1.9.0
 requests-oauthlib==1.3.0
 requests==2.25.1

diff --git a/reqs/3.7/requirements-sty.txt b/reqs/3.7/requirements-sty.txt
@@ -5,7 +5,6 @@
 #    pip-compile --no-annotate --output-file=reqs/3.7/requirements-sty.txt reqs/3.7/requirements-sty.in
 #
 absl-py==0.12.0
-amplitf==0.0.1a2
 apipkg==1.5
 appdirs==1.4.4
 astroid==2.5.1
@@ -36,7 +35,7 @@ flake8==3.9.0
 flatbuffers==1.12
 gast==0.3.3
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 grpcio==1.32.0
@@ -120,7 +119,7 @@ traitlets==5.0.5
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 urllib3==1.26.4
-virtualenv==20.4.2
+virtualenv==20.4.3
 werkzeug==1.0.1
 wheel==0.36.2
 wrapt==1.12.1

diff --git a/reqs/3.7/requirements-test.txt b/reqs/3.7/requirements-test.txt
@@ -5,7 +5,6 @@
 #    pip-compile --no-annotate --output-file=reqs/3.7/requirements-test.txt reqs/3.7/requirements-test.in
 #
 absl-py==0.12.0
-amplitf==0.0.1a2
 apipkg==1.5
 astunparse==1.6.3
 attrs==20.3.0
@@ -22,7 +21,7 @@ expertsystem==0.7.0
 flatbuffers==1.12
 gast==0.3.3
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 grpcio==1.32.0

diff --git a/reqs/3.7/requirements.txt b/reqs/3.7/requirements.txt
@@ -5,7 +5,6 @@
 #    pip-compile --no-annotate --output-file=reqs/3.7/requirements.txt reqs/3.7/requirements.in
 #
 absl-py==0.12.0
-amplitf==0.0.1a2
 astunparse==1.6.3
 attrs==20.3.0
 cachetools==4.2.1
@@ -18,7 +17,7 @@ expertsystem==0.7.0
 flatbuffers==1.12
 gast==0.3.3
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 grpcio==1.32.0
 h5py==2.10.0

diff --git a/reqs/3.8/requirements-dev.txt b/reqs/3.8/requirements-dev.txt
@@ -6,7 +6,6 @@
 #
 absl-py==0.12.0
 alabaster==0.7.12
-amplitf==0.0.1a2
 anyio==2.2.0
 apipkg==1.5
 appdirs==1.4.4
@@ -51,7 +50,7 @@ gast==0.3.3
 gitdb==4.0.5
 gitpython==3.1.14
 google-auth-oauthlib==0.4.3
-google-auth==1.27.1
+google-auth==1.28.0
 google-pasta==0.2.0
 gprof2dot==2021.2.21
 graphviz==0.16
@@ -77,7 +76,7 @@ json5==0.9.5
 jsonschema==3.2.0
 jupyter-cache==0.4.2
 jupyter-client==6.1.12
-jupyter-console==6.2.0
+jupyter-console==6.3.0
 jupyter-core==4.7.1
 jupyter-packaging==0.7.12
 jupyter-server==1.4.1
@@ -98,7 +97,7 @@ markdown==3.3.4
 markupsafe==1.1.1
 matplotlib==3.3.4
 mccabe==0.6.1
-mdit-py-plugins==0.2.5
+mdit-py-plugins==0.2.6
 mistune==0.8.4
 mpmath==1.2.1
 mypy-extensions==0.4.3
@@ -162,7 +161,7 @@ pytoml==0.1.21
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
-qtconsole==5.0.2
+qtconsole==5.0.3
 qtpy==1.9.0
 regex==2020.11.13
 requests-oauthlib==1.3.0
@@ -209,7 +208,7 @@ traitlets==5.0.5
 typed-ast==1.4.2
 typing-extensions==3.7.4.3
 urllib3==1.26.4
-virtualenv==20.4.2
+virtualenv==20.4.3
 wcwidth==0.2.5
 webencodings==0.5.1
 werkzeug==1.0.1