Merge pull request #1 from Danko-Lab/main

merge
Danko-Lab · Jun 21, 2022 · 1ddf807 · 1ddf807
2 parents 3cc61c4 + b40d169
commit 1ddf807
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diff --git a/BayesPrism/.gitignore b/BayesPrism/.gitignore
diff --git a/BayesPrism/R/embedding_learning.R b/BayesPrism/R/embedding_learning.R
@@ -339,7 +339,7 @@ learn.embedding <- function(bp,
 	EM.res.new <- run.EM (eta_prior = eta_prior,
 						  eta_post = EM.res$eta_post,
 				   		  psi_env = bp@reference.update@psi_env,
-				   		  theta_env = bp@posterior.theta_f[,rownames(bp@reference.update@psi_env)], 
+				   		  theta_env = bp@posterior.theta_f@theta[,rownames(bp@reference.update@psi_env)], 
 				   		  X = bp@prism@mixture,
 				   		  cycle = cycle,
 				   		  gibbs.control = gibbs.control,