The proportion of cell population in input data

[Chaosli98]

Hi, very useful tool!
I wonder if the ratio of cell types in the input data is needed to maintain their true biological fraction, or just a certain number of cells is enough?

[tinyi]

Hi, Thank you for your interest in our tool. BayesPrism does not take the cell type fraction from the scRNA-seq reference into consideration. We only recommend having a sufficient number of cells >20 or 50 for each cell type when generating the reference. Best, Tinyi

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On Wed, Sep 7, 2022 at 9:12 PM Chaosli98 ***@***.***> wrote: Hi, very useful tool! I wonder if the ratio of cell types in the input data is needed to maintain their true biological fraction, or just a certain number of cells is enough? — Reply to this email directly, view it on GitHub <#13>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AB4NHSZRSZNE6FIIBRGBQHTV5E4O7ANCNFSM6AAAAAAQHIEBC4> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>