Merge master into dependabot/pip/mypy-1.10.0

DataBiosphere · Apr 25, 2024 · 43bee49 · 43bee49
2 parents c8c4bed + 402cf38
commit 43bee49
Show file tree

Hide file tree

Showing 2 changed files with 3 additions and 1 deletion.
diff --git a/src/toil/batchSystems/singleMachine.py b/src/toil/batchSystems/singleMachine.py
@@ -655,6 +655,7 @@ def _startChild(self, jobCommand, jobID, coreFractions, jobMemory, jobDisk, job_
             # and all its children together. We assume that the
             # process group ID will equal the PID of the process we
             # are starting.
+            logger.debug("Attempting to run job command: %s", jobCommand)
             popen = subprocess.Popen(jobCommand,
                                      shell=True,
                                      env=child_environment,

diff --git a/src/toil/worker.py b/src/toil/worker.py
@@ -159,6 +159,8 @@ def workerScript(
     if config.colored_logs:
         install_log_color()
 
+    logger.debug("Worker started for job %s...", job_name)
+
     ##########################################
     #Create the worker killer, if requested
     ##########################################
@@ -749,7 +751,6 @@ def in_contexts(contexts: List[str]) -> Iterator[None]:
 def main(argv: Optional[List[str]] = None) -> None:
     if argv is None:
         argv = sys.argv
-
     # Parse our command line
     options = parse_args(argv)