Added S4 to the postsnd script; created run script for S4.

Also disabled the Gempak commands on S4.

References: NOAA-EMC#138

driver/product/run_postsnd.sh.s4

@@ -0,0 +1,197 @@
+#!/bin/ksh -l
+#SBATCH -A fv3-cam        # Use a valid account
+#SBATCH --time=2:30:00    # For big directories you may want 8:00:00 hrs
+#SBATCH -N 20              # Probably 2 to 4 depending on amount of data
+#SBATCH -n 40
+#SBATCH -o %x.o%j
+#SBATCH -J postsnd
+
+############################################
+# Loading module
+############################################
+. $MODULESHOME/init/ksh
+
+# Loading Intel Compiler Suite
+module load license_intel/S4
+module load intel/18.0.3
+module load emc-hpc-stack/2020-q3
+
+module use -a /scratch2/NCEPDEV/nwprod/NCEPLIBS/modulefiles
+
+# Loading nceplibs modules
+module load sigio/2.3.2
+module load bacio/2.4.1
+module load sp/2.3.3
+module load w3emc/2.7.3
+module load w3nco/2.4.1
+module load bufr/11.4.0
+module load nemsio/2.5.2
+module load gempak/7.4.2
+module load prod_util/1.2.1
+
+module load netcdf_parallel/4.7.4
+module load hdf5_parallel/1.10.6
+module load miniconda/3.7-base
+
+########################################
+# Runs GFS BUFR SOUNDINGS
+########################################
+set -xa
+
+export OMP_NUM_THREADS=1
+export KMP_AFFINITY=disabled
+export OMP_STACKSIZE=2048m
+export MP_LABELIO=yes
+export MP_STDOUTMODE=ordered
+
+#export machine="WCOSS_C"
+#machine="WCOSS_DELL_P3"
+#machine="HERA"
+machine="S4"
+#machine="JET"
+export npe_postsnd=32
+export npe_postsndcfp=10
+export OUTPUT_FILE=${OUTPUT_FILE:-netcdf}
+if [ $machine == "WCOSS_C" ]; then
+##For WCOSS-Cray##################
+export FHMAX_HF_GFS=120
+export FHOUT_HF_GFS=1
+export launcher="aprun"
+export npe_node_postsnd=3
+export NTHREADS_POSTSND=1
+export npe_node_postsndcfp=3
+export NTHREADS_POSTSNDCFP=1
+export APRUN_POSTSND="$launcher -j 1 -n $npe_postsnd -N $npe_node_postsnd -d $NTHREADS_POSTSND -cc depth"
+export APRUN_POSTSNDCFP="$launcher -j 1 -n $npe_postsndcfp -N $npe_node_postsndcfp -d $NTHREADS_POSTSNDCFP cfp"
+elif [ $machine == "WCOSS_DELL_P3" ]; then
+##For WCOSS-Dell ################
+export FHMAX_HF_GFS=120
+export FHOUT_HF_GFS=1
+export launcher="mpirun -n"
+export APRUN_POSTSND="$launcher $npe_postsnd"
+export APRUN_POSTSNDCFP="$launcher $npe_postsndcfp"
+elif [ $machine == "S4" ]; then
+##For S4################
+##export FHMAX_HF_GFS=120
+##export FHOUT_HF_GFS=1
+export FHMAX_HF_GFS=120
+export FHOUT_HF_GFS=3
+export npe_postsnd=32
+export npe_node_postsnd=20
+export launcher="mpirun"
+#export APRUN_POSTSND=srun
+export APRUN_POSTSND="$launcher -n $npe_postsnd"
+export APRUN_POSTSNDCFP="$launcher -n $npe_postsndcfp"
+else
+##For Theia, Jet,hera################
+##export FHMAX_HF_GFS=120
+##export FHOUT_HF_GFS=1
+export FHMAX_HF_GFS=120
+export FHOUT_HF_GFS=3
+export npe_postsnd=40
+export npe_node_postsnd=20
+export launcher="mpirun"
+#export APRUN_POSTSND=srun
+export APRUN_POSTSND="$launcher -n $npe_postsnd"
+export APRUN_POSTSNDCFP="$launcher -n $npe_postsndcfp"
+fi
+
+#export PS4='$SECONDS + '
+date
+# #### 08/25/1999 ###################
+# SET SHELL PROCESSING VARIABLES
+# ###################################
+#
+#Specify whether the run is production or development
+#
+export envir=${envir:-prod}
+
+####################################
+# Specify version numbers
+####################################
+export gfs_bufrsnd_ver=${gfs_bufrsnd_ver:-v1.0.2}
+export gsm_ver=${gsm_ver:-v12.0.0}
+export util_ver=${util_ver:-v1.0.0}
+
+# obtain unique process id (pid) and make temp directories
+#
+export pid=$$
+#export DATA_IN=${DATA_IN:-/tmpnwprd1}
+#export DATA=$DATA_IN/${job}.${pid}
+export DATA_IN=${DATA_IN:-/scratch2/NCEPDEV/stmp1/$USER}
+export DATA=$DATA_IN/postsnd.${pid}
+mkdir -p $DATA
+cd $DATA
+export PDY=20190223
+export cyc=00
+##export PDY=20200113
+##export cyc=12
+export STARTHOUR=00
+export ENDHOUR=180
+
+####################################
+# File To Log Msgs
+####################################
+job=gfs_postsnd_test
+export jlogfile=/com/logs/jlogfiles/jlogfile.${job}.${pid}
+
+####################################
+# Determine Job Output Name on System
+####################################
+export outid="LL$job"
+export jobid="${outid}.o${pid}"
+export pgmout="OUTPUT.${pid}"
+
+export cycle=t${cyc}z
+
+export SENDCOM=YES
+export SENDECF=YES
+export SENDDBN=YES
+
+export NET=gfs
+export RUN=gfs
+export model=gfs
+export pcom=$DATA_IN/pcom/gfs
+mkdir -p $pcom
+
+###################################
+# Set up the UTILITIES
+###################################
+
+export HOMEbufrsnd=/scratch2/NCEPDEV/fv3-cam/noscrub/Guang.Ping.Lou/gfsv16bnetcd4
+#export HOMEbufrsnd=/scratch2/NCEPDEV/fv3-cam/noscrub/Guang.Ping.Lou/global-workflow
+#export HOMEbufrsnd=/scratch4/NCEPDEV/meso/save/Guang.Ping.Lou/fv3gfs
+#export HOMEbufrsnd=/gpfs/hps3/emc/meso/noscrub/Guang.Ping.Lou/fv3gfs
+#export HOMEbufrsnd=/gpfs/hps3/emc/meso/noscrub/Guang.Ping.Lou/Bufr_sounding
+#export HOMEbufrsnd=/gpfs/hps3/emc/meso/noscrub/Guang.Ping.Lou/bufr_fnl_mpmd2_test
+
+##############################
+# Define COM Directories
+##############################
+##export COMIN=/gpfs/hps/ptmp/emc.glopara/com2/${NET}/para/${RUN}.${PDY}
+##export COMIN=/gpfs/hps3/emc/meso/noscrub/Guang.Ping.Lou/fv3data/${RUN}.${PDY}/$cyc
+##export COMIN=/gpfs/hps/nco/ops/com/gfs/prod/${RUN}.${PDY}
+#export COMIN=/scratch4/NCEPDEV/meso/save/Guang.Ping.Lou/fv3data/${RUN}.${PDY}/$cyc
+##export COMIN=/scratch2/NCEPDEV/fv3-cam//noscrub/Guang.Ping.Lou/gfs.${PDY}_nc_lossy/$cyc
+##export COMIN=/scratch2/NCEPDEV/fv3-cam//noscrub/Guang.Ping.Lou/data_v16rt2
+export COMIN=/scratch1/NCEPDEV/global/glopara/ptmp/v16retro1/gfs.${PDY}/$cyc
+
+export COMOUT=$DATA_IN/com2/${NET}/${envir}/${RUN}.${PDY}
+mkdir -p $COMOUT
+export COMAWP=$DATA_IN/com2/nawips/${envir}/${RUN}.${PDY}
+mkdir -p $COMAWP
+env
+
+export KEEPDATA=YES
+########################################################
+# Execute the script.
+#$SCRbufrsnd/exgfs_atmos_postsnd.sh
+${HOMEbufrsnd}/jobs/JGFS_ATMOS_POSTSND
+########################################################
+
+#cat $pgmout
+
+#cd /tmpnwprd1
+#rm -rf $DATA
+date
+

scripts/exgfs_atmos_postsnd.sh

@@ -138,7 +138,7 @@ fi
 # add appropriate WMO Headers.
 ########################################
 collect=' 1 2 3 4 5 6 7 8 9'
-if [ $machine == "HERA" -o  $machine == "JET" ]; then
+if [ $machine == "HERA" -o  $machine == "JET" -o $machine == "S4" ]; then
 for m in ${collect}
 do
 sh $USHbufrsnd/gfs_sndp.sh $m
@@ -147,7 +147,9 @@ done
 ################################################
 # Convert the bufr soundings into GEMPAK files
 ################################################
-sh $USHbufrsnd/gfs_bfr2gpk.sh
+if [ $machine != "S4" ]; then
+   sh $USHbufrsnd/gfs_bfr2gpk.sh
+fi
 
 else
 rm -rf poe_col