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import omadb
# these requests work fine
dendropy_tree = c.taxonomy.dendropy_tree(root='Homininae')
dendropy_tree = c.taxonomy.dendropy_tree(root='Homininae')
dendropy_tree = c.taxonomy.dendropy_tree(root='Hominidae')
dendropy_tree = c.taxonomy.dendropy_tree(root='Hominoidea')
dendropy_tree = c.taxonomy.dendropy_tree(root='Catarrhini')
dendropy_tree = c.taxonomy.dendropy_tree(root='Simiiformes')
dendropy_tree = c.taxonomy.dendropy_tree(root='Primates')
dendropy_tree = c.taxonomy.dendropy_tree(root='Euarchontoglires')
#below this line the API returns a 500 server error:
dendropy_tree = c.taxonomy.dendropy_tree(root='Boreoeutheria')
dendropy_tree = c.taxonomy.dendropy_tree(root='Eutheria')
dendropy_tree = c.taxonomy.dendropy_tree(root='Theria')
dendropy_tree = c.taxonomy.dendropy_tree(root='Amniota')
error:
Traceback (most recent call last):
File "<ipython-input-60-6c7b6d8ed68f>", line 1, in <module>
dendropy_tree = c.taxonomy.dendropy_tree(root='Boreoeutheria')
File "/usr/local/lib/python3.7/site-packages/omadb/OMARestAPI.py", line 1238, in dendropy_tree
struct = self.read(root)
File "/usr/local/lib/python3.7/site-packages/omadb/OMARestAPI.py", line 1186, in read
(format is not 'dictionary')))
File "/usr/local/lib/python3.7/site-packages/omadb/OMARestAPI.py", line 456, in _request
raise ClientException(response_status)
ClientException: 500 Server Error: Internal Server Error
Working up the tree from Homininae:
error:
Also, the same problem arises when interacting with the API through the website at this link(https://omabrowser.org/api/docs). E.g. https://omabrowser.org/api/taxonomy/Homininae/ works, but https://omabrowser.org/api/taxonomy/Amniota/ returns the 500 server error.
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