2nd April release to fix property tag

DiseaseOntology · Apr 18, 2019 · 48b5619 · 48b5619
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diff --git a/src/ontology/HumanDO.obo b/src/ontology/HumanDO.obo
diff --git a/src/ontology/HumanDO.owl b/src/ontology/HumanDO.owl
@@ -16,7 +16,6 @@
         <dc:description>The Disease Ontology has been developed as a standardized ontology for human disease with the purpose of providing the biomedical community with consistent, reusable and sustainable descriptions of human disease terms, phenotype characteristics and related medical vocabulary disease concepts.</dc:description>
         <dc:title>Human Disease Ontology</dc:title>
         <terms:license rdf:resource="https://creativecommons.org/publicdomain/zero/1.0/"/>
-        <oboInOwl:default-namespace>disease_ontology</oboInOwl:default-namespace>
         <oboInOwl:hasOBOFormatVersion rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.2</oboInOwl:hasOBOFormatVersion>
         <oboInOwl:saved-by>lschriml</oboInOwl:saved-by>
         <rdfs:comment>The Disease Ontology content is available via the Creative Commons Public Domain Dedication CC0 1.0 Universal license (https://creativecommons.org/publicdomain/zero/1.0/).</rdfs:comment>
@@ -28711,11 +28710,6 @@ OMIM mapping confirmed by DO. [LS].</rdfs:comment>
         <oboInOwl:created_by>emitraka</oboInOwl:created_by>
         <oboInOwl:creation_date>2015-01-29T15:52:18Z</oboInOwl:creation_date>
         <oboInOwl:hasDbXref>GARD:552</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:181800</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:607354</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:608765</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612238</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612239</oboInOwl:hasDbXref>
         <oboInOwl:hasOBONamespace>disease_ontology</oboInOwl:hasOBONamespace>
         <oboInOwl:id>DOID:0060250</oboInOwl:id>
         <rdfs:comment>NT MGI.</rdfs:comment>
@@ -59116,7 +59110,6 @@ OMIM mapping confirmed by DO. [LS].</rdfs:comment>
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/DOID_0080519">
         <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DOID_225"/>
         <obo:IAO_0000115>A syndrome that is characterised by pyoderma gangrenosum, pyogenic arthritis, acne and suppurative hidradenitis and heterozygous mutation in the PSTPIP1 gene on chromosome 15q24.</obo:IAO_0000115>
-        <oboInOwl:default-namespace>disease_ontology</oboInOwl:default-namespace>
         <oboInOwl:hasDbXref>OMIM:604416</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>ORDO:69126</oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>pyogenic arthritis, pyoderma gangrenosum and acne</oboInOwl:hasExactSynonym>
@@ -107634,7 +107627,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>ICD9CM:135</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>MESH:D012507</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C34995</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612388</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>ORDO:797</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:31541009</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0036202</oboInOwl:hasDbXref>
@@ -138509,7 +138501,6 @@ OMIM mapping by NeuroDevNet. [LS].</rdfs:comment>
         <oboInOwl:hasDbXref>GARD:6357</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>MESH:D004819</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C126877</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:226400</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:19138001</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0014522</oboInOwl:hasDbXref>
         <oboInOwl:hasOBONamespace>disease_ontology</oboInOwl:hasOBONamespace>
@@ -155985,11 +155976,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>MESH:D004829</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C3021</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>OMIM:600669</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:604827</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:606972</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:608762</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:609750</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:611934</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:19598007</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0014548</oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>Generalised epilepsy</oboInOwl:hasExactSynonym>
@@ -166617,12 +166603,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>NCI:C2921</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C3784</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C7586</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:605462</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613058</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613059</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613061</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613062</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613063</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:1338007</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:30649006</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0007117</oboInOwl:hasDbXref>
@@ -209190,9 +209170,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>MESH:D020190</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C84796</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>OMIM:254770</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:608816</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:611364</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:614280</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>ORDO:862</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:6204001</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0270853</oboInOwl:hasDbXref>
@@ -216455,7 +216432,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>ICD9CM:333.81</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>MESH:D001764</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C118723</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:606798</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:59026006</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0005747</oboInOwl:hasDbXref>
         <oboInOwl:hasOBONamespace>disease_ontology</oboInOwl:hasOBONamespace>
@@ -233811,7 +233787,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>MESH:D000163</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI2004_11_17:C2851</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C2851</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:609423</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:62479008</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0001175</oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>AIDS</oboInOwl:hasExactSynonym>
@@ -250237,8 +250212,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ICD-O:M9500/3</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>MESH:D009447</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>NCI:C3270</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613015</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613016</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>ORDO:635</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:87364003</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0027819</oboInOwl:hasDbXref>
@@ -257568,8 +257541,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>EFO:0002506</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>ICD9CM:715.3</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>MESH:D010003</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:610839</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612401</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C0157946</oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>Osteoarthrosis and allied disorder</oboInOwl:hasExactSynonym>
         <oboInOwl:hasExactSynonym>degenerative arthritis</oboInOwl:hasExactSynonym>
@@ -271996,13 +271967,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>KEGG:05210</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>MESH:D015179</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>OMIM:114500</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:611469</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612230</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612231</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612232</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612589</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612590</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:612592</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS_CUI:C1527249</oboInOwl:hasDbXref>
         <oboInOwl:hasOBONamespace>disease_ontology</oboInOwl:hasOBONamespace>
         <oboInOwl:id>DOID:9256</oboInOwl:id>
@@ -280544,7 +280508,6 @@ OMIM mapping confirmed by DO. [SN].</rdfs:comment>
         <oboInOwl:hasDbXref>NCI:C3167</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>OMIM:247640</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>OMIM:613065</oboInOwl:hasDbXref>
-        <oboInOwl:hasDbXref>OMIM:613067</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>ORDO:513</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:90151006</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US_2018_03_01:91857003</oboInOwl:hasDbXref>