Feat subset netcdf #732

	name: CI example notebooks

	on:
	push:
	branches:
	- "*"
	- "!v[0-9]+.[0-9]+.[0-9]+*"
	pull_request:
	branches:
	- "*"
	- "!v[0-9]+.[0-9]+.[0-9]+*"

	jobs:

	test:
	name: ${{ matrix.os}} py${{ matrix.python-version }}

	runs-on: ${{ matrix.os }}

	defaults:
	run:
	shell: bash -l {0}

	strategy:
	fail-fast: false
	matrix:
	os: [ "ubuntu-latest" ]
	python-version: [ "3.10"]

	steps:
	- name: Checkout repo
	uses: actions/checkout@v2.4.0

	- name: Setup gfortran
	uses: fortran-lang/setup-fortran@v1
	with:
	compiler: gcc
	version: 11

	- name: Set environment variables
	run: \|
	echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV
	echo "SETUPTOOLS_ENABLE_FEATURES=legacy-editable" >> $GITHUB_ENV

	- name: Setup micromamba
	uses: mamba-org/setup-micromamba@v1
	with:
	environment-file: environment.yml
	cache-environment: true
	cache-downloads: true

	- name: Install error reporter
	run: \|
	pip install pytest-github-actions-annotate-failures

	- name: Install dependencies and this package
	run: \|
	pip install -e .

	- name: Version info
	run: \|
	echo -------
	conda info -a
	echo -------
	conda list
	echo -------
	pip -V
	echo -------
	pip list

	- name: Import pywatershed
	run: \|
	python -c "import pywatershed"

	- name: Get GIS files for tests
	run: \|
	python pywatershed/utils/gis_files.py

	- name: Get additional domain files for notebooks
	run: \|
	python pywatershed/utils/addtl_domain_files.py

	- name: Run tests
	working-directory: autotest_exs
	run: \|
	pytest -s -vv --durations=0

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