…tor_lattice_quads

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This will replace the external field plasma lens

…tor_lattice_quads

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…tor_lattice_quads

…tor_lattice_quads

This is the same as the method used in ImpactX

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…tor_lattice_quads

…tor_lattice_quads

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updates:
- [github.com/hadialqattan/pycln: v2.0.1 → v2.0.3](hadialqattan/pycln@v2.0.1...v2.0.3)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

Update the Poisson Solver API to be more usable. Needed for ImpactX.

* initial work

* fixed bugs and added species

* update documentation

* delete unused file

* Add properties for neutron, hydrogen isotopes, helium isotopes

* Update code to be more consistent

* Correct typo

* Parse deuterium-tritium fusion

* Start putting in place the files for deuterium-tritium

* Update documentation

* Prepare structures for deuterium tritium

* Fix typo

* Fix compilation

* Add neutron

* Add correct formula for the cross-section

* Correct compilation error

* Fix nuclear fusion

* Reset benchmarks

* Prepare creation functor for 2-product fusion

* First implementation of momentum initialization

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* Use utility function for fusion

* Minor modification of variable names

* Fix GPU compilation

* Fix single precision compilation

* Update types

* Use util function in P-B fusion

* Correct compilation errors

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* Correct errors

* Update values of mass and charge

* Correct compilation error

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* Correct compilation error

* Correct compilation error

* Correct compilation error

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* Reset benchmark

* Use helium particle in proton-boron, to avoid resetting benchmark

* Fixed proton-boron test

* Revert "Fixed proton-boron test"

This reverts commit 73c8d9d.

* Incorporate Neil's recommendations

* Reset benchmarks

* Correct compilation errors

* Add new deuterium tritium automated test

* Correct formula of cross-section

* Correct cross-section

* Improve analysis script

* Add test of energy conservation

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* Add test of conservation of momentum

* Progress in analysis script

* Fix error in the initial energy of the deuterium particles

* Add check of isotropy

* Clean up the test script

* Rewrite p_sq formula in a way to avoids machine-precision negative numbers

* Add checksum

* Clean up code

* Apply suggestions from code review

* Update PR according to comments

* Update benchmark

* Address additional comments

* Numerical Literals

Co-authored-by: Luca Fedeli <luca.fedeli@cea.fr>
Co-authored-by: Neïl Zaim <49716072+NeilZaim@users.noreply.github.com>

amrex::Array4 is a 4D array that can be accessed with three spatial indices
plus an optional component index.  We must always provide all three spatial
indices even in 2D.

…arpX#3251)

…WarpX#3239)

* Fixes to allow mixed precision, ParticleReal float, Real double

* Fix for the optical depth

* A different way of fixing QuantumSynchrotronEvolveOpticalDepth

* In the QED code, consistently use ParticleReal

…tor_lattice_quads

Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>

Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>

It is not clear why there was a change, but the difference is
essentially round off in the E field. The important thing is that the
particles are still correct.

Add include statements

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

Add includes

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

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