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v1.5.0 #109

Merged
merged 23 commits into from
Apr 2, 2021
Merged

v1.5.0 #109

merged 23 commits into from
Apr 2, 2021

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leepc12
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@leepc12 leepc12 commented Apr 2, 2021

Please check your Caper configuration file at ~/.caper/default.conf to remove cromwell and womtool from the file. Then Caper will automatically download Cromwell/Womtool 59 and use them.

# remove these two lines
cromwell=~/.caper/cromwell_jar/cromwell-52.jar
womtool=~/.caper/womtool_jar/womtool-52.jar

Metadata DB is compatible between Cromwell 52 and 59.

  • Fixed a bug that takes too long to recursively localize big files from S3 to GCS

    • md5 checksum skipping flag was not propagated for recursive localization (in JSON, CSV, TSV) in autouri
    • Fixed in autouri
  • Upgraded default Cromwell from 52 to 59. Metadata DB is compatible between two versions.

@leepc12 leepc12 merged commit d23bd97 into master Apr 2, 2021
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