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Update job script (#1757)
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* Update job script for DKRZ

* Remove unused script for CLUSTER

* Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh

* Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh

* Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh

* Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh

* Set environment properly
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mattiarighi committed Jul 23, 2020
1 parent 28e4c3c commit a44254f
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22 changes: 12 additions & 10 deletions esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh
Original file line number Diff line number Diff line change
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#!/bin/bash -e
###############################################################################
### BATCH SCRIPT TO RUN THE ESMVALTOOL AT DKRZ MISTRAL
### Author: Mattia Righi (DLR)
###############################################################################
#SBATCH --partition=compute
#SBATCH --time=08:00:00
#SBATCH --partition=prepost
#SBATCH --exclusive
#SBATCH --nodes=1
#SBATCH --mem=0
#SBATCH --time=12:00:00
#SBATCH --mail-type=FAIL,END
#SBATCH --account=bd0854
#SBATCH --account=XXXXXX
#SBATCH --output=job_%j.out.log
#SBATCH --error=job_%j.err.log
###############################################################################

# Submit job with: sbatch job_DKRZ-MISTRAL.sh

# Input arguments
RECIPE=recipe_perfmetrics_CMIP5.yml
CONFIG=config-user.yml
RECIPE= # e.g. recipe_perfmetrics_CMIP5.yml
CONFIG= # e.g. config-user.yml

# Set environment
CONDAPATH= # e.g. /home/soft/miniconda3/
CONDAENV= # e.g. $CONDAPATH/envs/esmvaltool/bin
ESMVALPATH= # e.g. /home/ESMValTool/esmvaltool

# Changes below this line should not be required
export PATH=$PATH:$CONDAPATH/bin/
source $CONDAPATH/etc/profile.d/conda.sh
conda activate esmvaltool
conda info --envs
$CONDAENV/esmvaltool $ESMVALPATH/recipes/$RECIPE -c $ESMVALPATH/$CONFIG

esmvaltool run --config-file $CONFIG $RECIPE
39 changes: 0 additions & 39 deletions esmvaltool/utils/batch-jobs/job_PA2-CLUSTER.sh

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