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testing vagrant #1
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Great, ideally we may want to add preset script and dataset for tutorials/teaching. |
I am testing it now. One thing it would be good to add to the instructions is to indicate that it will great a folder named RDataTracker-vagrant so people might think about where to run the git clone command. |
Following the instructions, the VM was not able to start for me. Here is the complete output. I may have an old version of VirtualBox or Vagrant. I will try to update those and try again.
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After updating VirutalBox, I get this error. Will try upgrading Vagrant.
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I think it is the machine from your earlier test that failed (it tells you that the machine as already been provisioned). Could you remove the VM from VB (right click on it in the main interface, remove, delete all files). In the RDataTracker-Vagrant directory remove the directory ".vagrant". Then try again. I cannot reproduce the issue. Are you using windows, mac, linux as host? Matthew, did you run on any issue with the latest version when you tried? Regarding the "slowness" what seems the longer to me is the dist-upgrade, similar experience for you Matthew? |
Just to be a bit clearer, "already provisioned", is normal once |
Ok, the desktop is showing up now. It's doing a bunch more downloads of archives now. |
I was able to login as vagrant. What next? Does the VM contain our software at this point or is it just Ubuntu? Also, there were some error messages along the way. I will attach a file with the complete output so someone can read through it and check out the errors to see if they are important. |
Hmm. I can't seem to attach the file as an rtf, pdf or a zip. It's easier to read that way since the error messages show up in red. Here it is as plain text. I can email the colorized file to someone when they work on this. (As I reminder to myself, it is in ~/tmp/VagrantOutput.) |
You have RStudio and RDataTracker installed. You have DDG-Explorer master version built in ~/DDG-Explorer So normally you have all the tools we have that I am aware of. We probably wants to put shortcut on the desktop, but I am not familiar with the worflow of scientist, so I need some help to configure the machine in a way that makes sense for those users. |
@blernermhc yes, please send it to me by e-mail. |
It's on its way, emailed to your gmail address. Barb
http://www.getpostbox.comBarbara Lerner |
Should be dealt with by Which does this:
Which fix the dependency problem on You also have ttyname error in issue #, but as far as I can tell not a bigy for us. Let me know if I missed the error you where talking about. |
@blernermhc ok, got your e-mail looking at the other issues. |
Ok, I see DDG Explorer. I found RStudio in Computer / shared and then an RStudio folder. When I double-click it, there is an install button. Is that what you expect to happen, or should it already be installed? If so, where? |
On the top left, you have a |
Ok, RStudio starts up. RDataTracker is not installed, though. Do you want the Vagrant output from this attempt? |
I tried deleting and starting over. Still, when I start RStudio and look in the Packages list, RDataTracker is not there. Are you expecting it to be? Here are some errors related to RStudio: I am attaching the complete vagrant output. (Not colorized. I ran it in an Emacs shell and I can't see a way to keep the colors when I save it to a file.) This is running on a Mac 10.10.5, VirtualBox 5.0.24, vagrant 1.8.4. |
For the error, please see two posts above. The screenshot in the previous post is what I obtain using the current head of the repository after installation with no extra-steps. RDataTracker seems installed to me. Are you sure you are using the latest version of the repository? |
Ok, trying again after doing
and removing the virtual machine from virtual box. |
Don't forget |
Still seeing the same behavior. I have now deleted the RDataTracker-vagrant folder and am starting over with git clone. |
What behaviour? |
RDataTracker is not installed. Barb
http://www.getpostbox.comBarbara Lerner |
RDataTracker is still not found. Here is a screenshot and also the complete capture from removing the old RDataTracker-vagrant, new clone, through vagrant up. Still getting errors installing RStudio and RDataTracker is not found within RStudio. |
I cannot reproduce the issue here. I have made some changes, but not sure it will address the problem. From what I see in your output, some of the provisioning script is not even being executed (for example DDG-Explorer compilation output is not present etc.). Did you edit the files or is it everything? No idea of what may cause such issue. |
I have not edited anything. I will probably not have a chance to try this again until tomorrow (Wednesday). |
We think we found the problem with Rahman, doing some test and committing if our changes fix the issue. |
We are getting there. We fixed permission on shared files which were not necessarily the same on every machines. |
Success!!!! |
Ah great! Thank you very much for your patience Barbara! |
Here is the output in case it is of interest. |
Hey Thomas, just tried it out on my Mac and it works. Took about about 20 minutes to install everything and launch. I really like the idea of having a "preset" / consistent environment for teaching and as an example for people. I'll have my student try it out too.
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