feature_so_term implementation #89
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muffato
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Feb 13, 2019
twalsh-ebi
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Aug 31, 2023
* Add checks on Variation table * Add check on VariationFeature * Add Y PAR check on variation feature * Add VariationFeature allele check * Count the duplicates in variation_feature * Check for empty allele at start of allele_string
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Bio::EnsEMBL::Feature in the core API is changing to implement a feature_so_term method, similar to the already existing feature_so_acc method.
These changes to the core API are included in Ensembl/ensembl#364.
This updates the compara API to support that method where the feature_so_acc was already supported.
Tests have been updated.