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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 445 151

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 142 24

  3. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 138 113

  4. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 138 62

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 79 75

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 60 29

Repositories

Showing 10 of 209 repositories
  • ensembl-metadata-api Public

    ensembl_genome_metadata schema SQLAlchemy ORM layer

    Ensembl/ensembl-metadata-api’s past year of commit activity
    Python 1 Apache-2.0 2 0 3 Updated Sep 18, 2024
  • Bio-DB-HTS Public

    Git repo for Bio::DB::HTS module on CPAN, providing Perl links into HTSlib

    Ensembl/Bio-DB-HTS’s past year of commit activity
    Perl 24 Apache-2.0 16 10 0 Updated Sep 18, 2024
  • ensembl-genomio Public

    Pipelines to turn basic genomic data into Ensembl cores and back

    Ensembl/ensembl-genomio’s past year of commit activity
    Python 9 Apache-2.0 7 0 2 Updated Sep 18, 2024
  • ensembl-webcode Public

    The code to run an Ensembl website

    Ensembl/ensembl-webcode’s past year of commit activity
    Perl 22 Apache-2.0 48 0 3 Updated Sep 18, 2024
  • tark Public
    Ensembl/tark’s past year of commit activity
    HTML 4 Apache-2.0 3 0 3 Updated Sep 18, 2024
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara’s past year of commit activity
    Perl 51 Apache-2.0 69 0 10 Updated Sep 18, 2024
  • ensembl-xs Public

    A collection of XS modules to be used with the Ensembl APIs

    Ensembl/ensembl-xs’s past year of commit activity
    Perl 6 Apache-2.0 2 0 0 Updated Sep 18, 2024
  • ensembl-ontology-schema Public

    Schema for the Ensembl ontology database

    Ensembl/ensembl-ontology-schema’s past year of commit activity
    TSQL 1 1 0 0 Updated Sep 18, 2024
  • ensembl-io Public

    File parsing and writing code for Ensembl

    Ensembl/ensembl-io’s past year of commit activity
    Perl 10 Apache-2.0 18 0 1 Updated Sep 18, 2024
  • public-plugins Public

    Plugins for an Ensembl website

    Ensembl/public-plugins’s past year of commit activity
    JavaScript 9 Apache-2.0 46 0 4 Updated Sep 18, 2024