@Ensembl

Ensembl Project

  • EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

    Perl 29 18 Apache-2.0 Updated Aug 17, 2018
  • The Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 97 39 Updated Aug 17, 2018
  • The Ensembl Core Perl API and SQL schema

    Perl 41 50 Apache-2.0 Updated Aug 17, 2018
  • The Ensembl Compara Perl API and SQL schema

    Perl 22 37 Apache-2.0 Updated Aug 17, 2018
  • Perl 1 Updated Aug 17, 2018
  • Plugins for an Ensembl website

    JavaScript 4 20 Apache-2.0 Updated Aug 17, 2018
  • Test libraries and harnesses used for running the Ensembl test suite

    Perl 4 8 Apache-2.0 Updated Aug 17, 2018
  • Linking GWAS studies to genes through cis-regulatory datasets

    Jupyter Notebook 6 5 Apache-2.0 Updated Aug 17, 2018
  • Ensembl Funcgen Perl API and SQL schema

    Perl 8 12 Apache-2.0 Updated Aug 16, 2018
  • Ensembl's Automated QC Framework

    Java 6 22 Apache-2.0 Updated Aug 16, 2018
  • The code to run an Ensembl website

    Perl 14 36 Apache-2.0 Updated Aug 16, 2018
  • Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines

    Perl 6 17 Apache-2.0 Updated Aug 16, 2018
  • Ensembl Production code

    Perl 9 23 Apache-2.0 Updated Aug 16, 2018
  • Formulas hosted from the homebrew project from retired or third party repos with minor edits

    Ruby 3 Updated Aug 15, 2018
  • Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 69 33 Apache-2.0 Updated Aug 15, 2018
  • A collection of tools which Ensembl uses to work with Git

    Perl 5 6 Apache-2.0 Updated Aug 15, 2018
  • Dummy repository to test git operations and scripts

    Updated Aug 15, 2018
  • Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 48 46 Apache-2.0 Updated Aug 15, 2018
  • The Ensembl Variation Perl API and SQL schema

    Perl 19 34 Apache-2.0 Updated Aug 15, 2018
  • Specifications and implementation of the TrackHub registry

    Perl 5 1 Updated Aug 14, 2018
  • Python 1 3 Apache-2.0 Updated Aug 14, 2018
  • Code for checking Ensembl databases during release production

    Perl 1 3 Apache-2.0 Updated Aug 14, 2018
  • Meta formulas for homebrew/linuxbrew

    Ruby 1 4 Updated Aug 14, 2018
  • File parsing and writing code for Ensembl

    Perl 4 13 Apache-2.0 Updated Aug 14, 2018
  • API for storing and querying metadata from Ensembl and EnsemblGenomes

    Perl 2 1 Apache-2.0 Updated Aug 10, 2018
  • Python Apache-2.0 Updated Aug 9, 2018
  • A collection of additional cpanfiles that have no natural home with any project

    Perl 4 Apache-2.0 Updated Aug 9, 2018
  • Code to build the ensembl and ensembl genomes marts

    Java 2 Updated Aug 9, 2018
  • Sets of requirements files required to install a tool or setup a virtualenv

    3 Apache-2.0 Updated Aug 9, 2018
  • Web specific dependencies and customisations

    Ruby 1 1 Updated Aug 8, 2018