Skip to content

Commit

Permalink
Use conventional compara_master name
Browse files Browse the repository at this point in the history
  • Loading branch information
James Allen committed Aug 25, 2020
1 parent c90a910 commit 3ae697d
Showing 1 changed file with 1 addition and 5 deletions.
6 changes: 1 addition & 5 deletions lib/Bio/EnsEMBL/DataCheck/Checks/ControlledTablesCompara.pm
Original file line number Diff line number Diff line change
Expand Up @@ -68,11 +68,7 @@ sub master_tables {
# This test requires a compara_master database in the registry,
# where the 'species' parameter is the same as the database name.
my $desc_1 = "Compara master database found";
my $master_db_name = 'ensembl_compara_master';
my $division = $self->dba->get_division;
if ($division ne 'vertebrates') {
$master_db_name =~ s/ensembl/$division/;
}
my $master_db_name = 'compara_master';
my $master_dba = $self->get_dba($master_db_name, 'compara');

if (ok(defined $master_dba, $desc_1)) {
Expand Down

0 comments on commit 3ae697d

Please sign in to comment.