Skip to content

Commit

Permalink
Merge b8ce170 into e97b01f
Browse files Browse the repository at this point in the history
  • Loading branch information
marcoooo committed Jan 7, 2020
2 parents e97b01f + b8ce170 commit 421ae54
Show file tree
Hide file tree
Showing 199 changed files with 200 additions and 200 deletions.
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/BaseCheck.pm
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AlignFeatureExternalDB.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AltAllele.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AltAlleleGroup.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AnalysisDescription.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AnalysisFormat.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/Archive.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/ArraysHaveProbes.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AssemblyExceptions.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AssemblySeqregion.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/AttribValues.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/BlankEnums.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/BlankNulls.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CanonicalTranscripts.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CheckLastZCoverage.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/ChromosomesAnnotated.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CigarCheck.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareAllele.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareBiotypeGroup.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareGOXref.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareGenotypes.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareReadCoverage.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareSampleDisplays.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareSchema.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareSource.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareSynonym.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareVariationSets.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CompareXref.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/ControlledAnalysis.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/ControlledMetaKeys.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/ControlledTablesCore.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down
2 changes: 1 addition & 1 deletion lib/Bio/EnsEMBL/DataCheck/Checks/CoreTables.pm
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
=head1 LICENSE
Copyright [2018-2019] EMBL-European Bioinformatics Institute
Copyright [2018-2020] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the 'License');
you may not use this file except in compliance with the License.
Expand Down

0 comments on commit 421ae54

Please sign in to comment.