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Removed harcoded list of species for APPRIS since we will plug this D… #185

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merged 3 commits into from
Jan 28, 2020

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thomasmaurel
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@thomasmaurel thomasmaurel commented Jan 23, 2020

…C to the APPRIS pipeline and it's hard to keep this list up to date. Removed refseq_compare since this data is not populated anymore. Split AttribValues into AttribValuesExist and AttribValuesCoverage. AttribValuesExist checks that TSL, APPRIS and gencode_basic exist in the database. AttribValuesCoverage. checks TSL and APPRIS covers 95% of protein-coding gene on each chromosome

…C to the APPRIS pipeline and it's hard to keep this list up to date. Removed refseq_compare since this data is not populated anymore.
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coveralls commented Jan 23, 2020

Pull Request Test Coverage Report for Build 881

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage remained the same at 98.578%

Totals Coverage Status
Change from base Build 856: 0.0%
Covered Lines: 1803
Relevant Lines: 1829

💛 - Coveralls

…ttribValuesExist checks that TSL, APPRIS and gencode_basic exist in the database. AttribValuesCoverage. checks TSL and APPRIS covers 95% of protein-coding gene on each chromosome
@james-monkeyshines james-monkeyshines merged commit 7069e9a into release/100 Jan 28, 2020
@james-monkeyshines james-monkeyshines deleted the attrib_value_update branch January 28, 2020 15:06
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