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Version update for Release 112 #79

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Aug 22, 2023
Merged

Version update for Release 112 #79

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4 changes: 3 additions & 1 deletion modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
1 \N schema_version 111
1 \N schema_version 112
2 1 assembly.default NCBI34
3 1 species.taxonomy_id 9606
26 1 species.classification Homo sapiens
Expand Down Expand Up @@ -130,3 +130,5 @@
204 \N patch patch_109_110_b.sql|Add IS_PAR relationship to link X- and Y-PAR genes
205 \N patch patch_109_110_c.sql|Allow gene id to belong to multiple alt allele groups
206 \N patch patch_110_111_a.sql|schema_version
207 \N patch patch_111_112_a.sql|schema_version
208 \N patch patch_111_112_b.sql|Allow meta_value to be null
4 changes: 2 additions & 2 deletions modules/t/test-genome-DBs/homo_sapiens/core/table.sql
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Expand Up @@ -486,11 +486,11 @@ CREATE TABLE `meta` (
`meta_id` int(11) NOT NULL AUTO_INCREMENT,
`species_id` int(10) unsigned DEFAULT '1',
`meta_key` varchar(40) NOT NULL,
`meta_value` varchar(255) NOT NULL,
`meta_value` varchar(255) DEFAULT NULL,
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=207 DEFAULT CHARSET=latin1 ROW_FORMAT=DYNAMIC;
) ENGINE=MyISAM AUTO_INCREMENT=209 DEFAULT CHARSET=latin1 ROW_FORMAT=DYNAMIC;

CREATE TABLE `meta_coord` (
`table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
Expand Down
3 changes: 2 additions & 1 deletion modules/t/test-genome-DBs/multi/compara/meta.txt
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
111 \N schema_version 111
113 \N schema_version 112
2 \N schema_type compara
3 \N patch patch_84_85_a.sql|schema_version
4 \N patch patch_84_85_b.sql|gene_tree_root_attr
Expand Down Expand Up @@ -86,3 +86,4 @@
109 \N patch patch_109_110_b.sql|case_insensitive_stable_id_again
110 \N patch patch_109_110_c.sql|ncbi_taxa_name_varchar500
112 \N patch patch_110_111_a.sql|schema_version
114 \N patch patch_111_112_a.sql|schema_version
2 changes: 1 addition & 1 deletion modules/t/test-genome-DBs/multi/compara/table.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -437,7 +437,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`(255)),
KEY `species_value_idx` (`species_id`,`meta_value`(255))
) ENGINE=MyISAM AUTO_INCREMENT=113 DEFAULT CHARSET=latin1 ROW_FORMAT=DYNAMIC;
) ENGINE=MyISAM AUTO_INCREMENT=115 DEFAULT CHARSET=latin1 ROW_FORMAT=DYNAMIC;

CREATE TABLE `method_link` (
`method_link_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
Expand Down
4 changes: 3 additions & 1 deletion modules/t/test-genome-DBs/mus_musculus/core/meta.txt
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
1 \N schema_type core
2 \N schema_version 111
2 \N schema_version 112
3 \N patch patch_65_66_a.sql|schema_version
4 \N patch patch_65_66_b.sql|fix_external_db_id
5 \N patch patch_65_66_c.sql|reorder_unmapped_obj_index
Expand Down Expand Up @@ -208,3 +208,5 @@
1720 \N patch patch_109_110_b.sql|Add IS_PAR relationship to link X- and Y-PAR genes
1721 \N patch patch_109_110_c.sql|Allow gene id to belong to multiple alt allele groups
1722 \N patch patch_110_111_a.sql|schema_version
1723 \N patch patch_111_112_a.sql|schema_version
1724 \N patch patch_111_112_b.sql|Allow meta_value to be null
4 changes: 2 additions & 2 deletions modules/t/test-genome-DBs/mus_musculus/core/table.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -486,11 +486,11 @@ CREATE TABLE `meta` (
`meta_id` int(11) NOT NULL AUTO_INCREMENT,
`species_id` int(10) unsigned DEFAULT '1',
`meta_key` varchar(40) NOT NULL,
`meta_value` varchar(255) NOT NULL,
`meta_value` varchar(255) DEFAULT NULL,
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=1723 DEFAULT CHARSET=latin1 ROW_FORMAT=DYNAMIC;
) ENGINE=MyISAM AUTO_INCREMENT=1725 DEFAULT CHARSET=latin1 ROW_FORMAT=DYNAMIC;

CREATE TABLE `meta_coord` (
`table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
Expand Down