Update VEP plugin documentation script

[nuno-agostinho]

ENSVAR-5517: Requires Ensembl/VEP_plugins#674

Changelog

• a83766f: Format bullet and numbered lists
  • Bullet lists are created for line starting with characters like - and *
  • Numbered lists are created for numbered patterns like 2. and 4)
  • Nested lists are not currently supported
• 23c5c38: Display plugin arguments in a table
  • Arguments need to be in format argument_name : description
  • The table only starts after a sentence that contains the keyword key=value
• 2228285: Add usage examples from SYNOPSIS
• 6d2712e: Add code block when using ``` (like in Markdown)
• 6e65ae3: Format text surrounded with ` or ' as keyboard input (<kbd>)
• 2537dd5: Convert DOI (pattern like doi:10.235/343) to an URL
• 97d2793: Increase list of UNIX commands automatically recognised for code blocks
• 1cb91a2: Add anchor links to each plugin row

Bug fixes

• 3522e55: Fix table layout
  • Code blocks are now scrollable instead of increasing table width
• 0412c44: Avoid warning: Possible unintended interpolation of @: in string
• 8c4fde2: Fix <p> tags
• 3bc3609: Other minor bug fixes

Testing

Check the following features in my sandbox compared to the live website:

Feature	Sandbox example
Numbered list	Carol Condel
Bullet list	AlphaMissense dbNSFP
Table of plugin arguments	AlphaMissense satMutMPRA
Usage examples	AlphaMissense Carol Condel
Code block with ```	TranscriptAnnotator neXtProt
Format text as <kbd> when surrounded with ` or '	AncestralAlle Condel
DOI to URL	Condel

Please check as many plugin docs as you can! Thank you.

[nakib103]

Thanks nuno, the docs look better now!

[nakib103]

merged to release/112 and main