update RefSeq GRCh38 alignments

Ensembl · Aug 28, 2018 · b959f2e · b959f2e
1 parent 3514f68
commit b959f2e
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm
@@ -129,7 +129,7 @@ sub default_options {
             ],
           },
           GRCh38 => {
-            bam => $self->o('data_dir').'/interim_GRCh38.p10_knownrefseq_alignments_2017-01-13.bam',
+            bam => $self->o('data_dir').'/GRCh38.p12_knownrefseq_alignments.bam',
             freq_vcf => [
               {
                 file => $self->o('data_dir').'/1KG.phase3.GRCh38_2018_02_26.vcf.gz',