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fix haplo rest url
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ima23 committed Aug 17, 2018
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Expand Up @@ -122,7 +122,7 @@ The default output format is a simple tab-delimited file reporting all observed
The altered haplotype sequences can be obtained by switching to JSON output using `--json` which will display them by default.
Each transcript analysed is summarised as a JSON object written to one line of the output file.

The JSON output structure matches the format of the [transcript haplotype REST endpoint](http://rest.ensembl.org/documentation/info/transcript_haplotypes_get).
The JSON output structure matches the format of the [transcript haplotype REST endpoint](https://rest.ensembl.org/documentation/info/transcript_haplotypes_get).

You may exclude fields in the JSON from being exported with `--dont_export field1,field2`. This may be used, for example, to exclude the full haplotype sequence and aligned sequences from the output with `--dont_export seq,aligned_sequences`.

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