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Update r-lib actions #172

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merged 9 commits into from
Feb 19, 2023
Merged

Update r-lib actions #172

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07eafdc
update r-lib actions
trangdata Feb 19, 2023
d546a73
update dataset files
github-actions[bot] Feb 19, 2023
094e959
more symlinks
trangdata Feb 19, 2023
c2f7232
Merge branch 'fix-actions' of github.com:EpistasisLab/pmlb into fix-a…
trangdata Feb 19, 2023
954fcce
cp /opt/R/4.2.2/lib/R/bin/exec/R/
trangdata Feb 19, 2023
336b10a
reticulate
trangdata Feb 19, 2023
963e2c8
mkdir otp/R
trangdata Feb 19, 2023
0c0cd1b
find libstdc++
trangdata Feb 19, 2023
faa29a3
remove gcc installation
trangdata Feb 19, 2023
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10 changes: 2 additions & 8 deletions .github/workflows/pythonapp.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -50,8 +50,8 @@ jobs:
run: |
python -m pmlb.profiling

- uses: r-lib/actions/setup-r@v1
- uses: r-lib/actions/setup-pandoc@v1
- uses: r-lib/actions/setup-r@v2
- uses: r-lib/actions/setup-pandoc@v2
- name: Install R packages
run: Rscript -e 'install.packages(c("rmarkdown", "plotly", "dplyr", "htmlwidgets", "htmltools", "jsonlite", "readr", "DT", "remotes", "pmlbr"))'

Expand All @@ -64,12 +64,6 @@ jobs:
reticulate::py_discover_config()
shell: Rscript {0}

- name: Install gcc
run: |
conda install -c conda-forge libstdcxx-ng
sudo rm /usr/lib/x86_64-linux-gnu/libstdc++.so.6
sudo ln -s /home/runner/.local/share/r-miniconda/pkgs/libstdcxx-ng-12.1.0-ha89aaad_16/lib/libstdc++.so.6.0.30 /usr/lib/x86_64-linux-gnu/libstdc++.so.6

- name: Build site
run: |
Rscript -e 'print(reticulate::py_discover_config())'
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4 changes: 2 additions & 2 deletions .lfs-assets-id
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Expand Up @@ -106,7 +106,6 @@
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Expand All @@ -126,6 +125,7 @@
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5576935381b138bee157c44f39b203aa2e77860a32003494044771c582add97b
Expand All @@ -148,6 +148,7 @@
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Expand Down Expand Up @@ -393,7 +394,6 @@ f14fd01559b154384ecd57147159be294e4dbc29a1a0f037d65405b1a66fd056
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4 changes: 2 additions & 2 deletions pmlb/all_summary_stats.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -154,7 +154,7 @@ australian 690 14 4 3 7 categorical 2.0 0.0121319050619617 classification
auto 202 25 3 6 16 categorical 5.0 0.0453754533869228 classification
backache 180 32 22 4 6 categorical 2.0 0.521604938271605 classification
balance_scale 625 4 0 4 0 categorical 3.0 0.14622976 classification
banana 5300 2 0 0 2 continuous 2.0 0.0106907796368814 regression
banana 5300 2 0 0 2 binary 2.0 0.0106907796368815 classification
biomed 209 8 0 1 7 categorical 2.0 0.079691399006433 classification
breast 699 10 0 8 2 categorical 2.0 0.0963751609186227 classification
breast_cancer 286 9 2 6 1 categorical 2.0 0.1645068218494792 classification
Expand Down Expand Up @@ -402,7 +402,7 @@ tae 151 5 2 0 3 categorical 3.0 0.0003070040787684 classification
texture 5500 40 0 0 40 categorical 11.0 0.0 classification
threeOf9 512 9 9 0 0 categorical 2.0 0.00494384765625 classification
tic_tac_toe 958 9 0 9 0 categorical 2.0 0.0941810748732789 classification
titanic 2201 3 0 0 3 continuous 2.0 0.1252664674125861 regression
titanic 2207 8 1 3 4 binary 2.0 0.126512852276882 classification
tokyo1 959 44 0 2 42 categorical 2.0 0.0775149209345414 classification
twonorm 7400 20 0 0 20 categorical 2.0 6.57414170927761e-07 classification
vehicle 846 18 0 0 18 categorical 4.0 0.0004266124179609 classification
Expand Down