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Refine operators and their parameters in TPOT #351
Merged
rhiever
merged 37 commits into
EpistasisLab:development
from
weixuanfu:config_dict_rebase_dev
Feb 15, 2017
Merged
Refine operators and their parameters in TPOT #351
rhiever
merged 37 commits into
EpistasisLab:development
from
weixuanfu:config_dict_rebase_dev
Feb 15, 2017
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fix conflict with new development branch
fix conflict
fix import conflicts
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What does this PR do?
removes the whole operators folder and replace it by using two python dictionaries (config_classifier.py and config_regessor.py) and a operator utils (operator_utils.py)
provides a new parameter
operator_dict
(-operator
for command line) to easily customize list of operators and their parameters in TPOT using a operator dictionary file formatted as config_classifier.py. For interactive mode, this parameter takes a python dictionary directly and for command-line mode, this parameter takes file instead.Adds a
_pre_test
decorator to decorate pipeline generator, crossover operator and mutation operator to make sure the new pipeline is workable with a small simulated datasetfix > 15 unit tests for the new dynamically created operator classes.
Rebase Refine operators and their parameters in TPOT #343 with the latest dev branch
Rework pbar for better pipeline count
Add documentation for the new parameter for in command-line mode and interactive mode
Where should the reviewer start?
The operator utils (operator_utils.py)
How should this PR be tested?
Any tpot examples
What are the relevant issues?
#252
#296
Questions:
May need refine selector and preprocessor's parameters in the dictionaries.