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41 Open 75 Closed
41 Open 75 Closed
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Issues list

OptiType Fails to Open Intermediate BAM File
#149 opened Sep 10, 2024 by valeriaMCuevas
IOError: [Errno 2] could not open alignment file
#148 opened Jul 31, 2024 by lukaas33
HLA typing 10x scRNA-seq data with Optitype
#141 opened Oct 11, 2023 by Githubuser3838
this team is no longer maintained
#140 opened Oct 10, 2023 by SunYong0821
1
Maximal read length of 0 bps exceeded
#137 opened May 3, 2023 by frankligy
ValueError: too many values to unpack
#136 opened Apr 24, 2023 by szabolcstarapcsak
error using docker
#132 opened Aug 24, 2022 by anoronh4
output file column description
#131 opened May 31, 2022 by cjieming2
OptiType returns ValueError with some samples while running just fine with others
#129 opened May 17, 2022 by isinaltinkaya
what about MICA MICB typing
#127 opened Mar 22, 2022 by dingying85
1
Optitype fails to run silently and does not generate the resulting TSV file
#126 opened Mar 2, 2022 by b-niu
Optitype memory error in v1.3.5 due to pandas' reindex
#125 opened Feb 8, 2022 by jnktsj
3
conda installation issue
#124 opened Feb 7, 2022 by OrielResearchCure
1
conda installation issue
#123 opened Feb 7, 2022 by OrielResearchCure
Updated Docker version
#121 opened Apr 28, 2021 by YingYa
OptiType killed OOM
#120 opened Jan 19, 2021 by Akazhiel
4
How to deal with tumor-only samples?
#119 opened Nov 20, 2020 by qindan2008
IOError: [Errno 2] could not open alignment file
#116 opened Sep 3, 2020 by dstueckm
6
AttributeError: 'Index' object has no attribute 'difference'
#115 opened Sep 3, 2020 by renyuan01
2
Commands for Singularity Bootstrap of Docker Image
#114 opened Aug 27, 2020 by ilovesquishy
1
Ways to update hla reference/allele data?
#112 opened Aug 13, 2020 by ikarus97
7
IOError: [Errno 2] could not open alignment file result/2020_07_08_14_33_58/2020_07_08_14_33_58_1.bam: No such file or directory
#110 opened Jul 8, 2020 by frankligy
6
"ValueError: Length mismatch"
#109 opened Jun 18, 2020 by GBeattie
HLA class II prediction
#107 opened May 7, 2020 by PKazakova
5
Whether Optitype supports the target sequencing data ?
#94 opened Jun 17, 2019 by lidd77
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