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postembryonic neuronal lineage paper (FBrf0224164) [sf#28] #28

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mmc46 opened this issue Jun 11, 2015 · 4 comments
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postembryonic neuronal lineage paper (FBrf0224164) [sf#28] #28

mmc46 opened this issue Jun 11, 2015 · 4 comments
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new term request new terms needed VFB related to the nervous system/requested by VFB
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@mmc46
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mmc46 commented Jun 11, 2015

@gm119
Reported by gm119 on 2014-03-28 11:20 UTC
I am curating a paper that describes "most postembryonic neuronal lineages in the Drosophila thoracic central nervous system".

FBrf0224164 == Lacin et al., 2014, Development 141(5): 1011--1021

Title:

Transcription factor expression uniquely identifies most postembryonic neuronal lineages in the Drosophila thoracic central nervous system.

PMID: 24550109

They say they have 'constructed a gene expression map that enables the rapid, unambiguous identification of 23 of the 25 postembryonic lineages based on the expression of 15 transcription factors'.

I thought you might want to be alerted to this (!) as hopefully this can be used to make a nice set of terms for postembryonic neurons, plus I need a couple of specific anatomy terms to record phenotype from the paper.

The terms I need are for:

'3il axon bundle'
'3id axon bundle'
'lineage 3 postembryonic neuroblast clone'

I will attach my curation record so you can see where I need the terms.

@mmc46
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mmc46 commented Jun 11, 2015

Updated by mmc46 on 2014-06-02 14:13 UTC

  • Milestone: FB_2014_03 --> FB_2014_06

@mmc46 mmc46 changed the title postembryonic neuronal lineage paper (FBrf0224164) postembryonic neuronal lineage paper (FBrf0224164) [sf#28] Jun 11, 2015
@mmc46 mmc46 self-assigned this Jun 11, 2015
@mmc46 mmc46 added this to the FB_2014_06 milestone Jun 11, 2015
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mmc46 commented Jun 11, 2015

Commented by gm119 on 2014-07-29 15:24 UTC
I'm going to submit the main part of my record now, minus the new FBbt terms. Am happy to make the .edit record to add the FBbt terms once they are made.
This is what needs adding:

FBrf0224164

HGTX[D25]
3il?? | third instar larval stage

HGTX[Scer\UAS.cBa]
3id?? | third instar larval stage { Scer\GAL4[elav-C155] }

unc-4[Scer\UAS.cLa]
lineage 3 postembryonic neuroblast clone?? | third instar larval stage { Scer\GAL4[elav-C155] }

@mmc46 mmc46 added urgent important issue that needs to be fixed as a priority new term request new terms needed anatomy and removed urgent important issue that needs to be fixed as a priority labels Jun 11, 2015
@dosumis dosumis added the VFB related to the nervous system/requested by VFB label Dec 19, 2017
@Clare72 Clare72 removed the anatomy label May 7, 2019
@Clare72
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Clare72 commented Sep 21, 2020

primary and secondary lineages added in #750 (but not hemilineages or clones)

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Clare72 commented Jan 27, 2021

appropriate term for this is probably 'lineage 3 secondary neuron' FBbt:00048918

@Clare72 Clare72 closed this as completed Jan 27, 2021
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