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Add filter for mets to create_cohort #3

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jalavery opened this issue Jun 8, 2021 · 1 comment
Open

Add filter for mets to create_cohort #3

jalavery opened this issue Jun 8, 2021 · 1 comment
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@hfuchs5
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enhancement New feature or request

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@jalavery
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jalavery commented Jun 8, 2021

Incorporate filter for mets at diagnosis or post-diagnosis (>v1.1)

Have to think about specifying, e.g.:

  • Only bone mets
  • Bone mets +/- other mets
  • Bone mets OR liver mets
  • Combinations at/post diagnosis
@jalavery jalavery added the enhancement New feature or request label Jun 8, 2021
jalavery added a commit that referenced this issue Apr 28, 2022
@jalavery
attempt #3 at getting runiverse checks to run
b03963f 
* removed skip_on_ci() since runiverse was still trying to run checks
* simplified check_synapse_login() to return TRUE/FALSE, doesn't involve testthat::skip() anymore
* wrote the skips as three separate skips within each test. one is to check for synapser package, second is to check for synapse login, third is to check for appropriate access to data
@karissawhiting
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Be sure to document if we change in new version

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@karissawhiting @jalavery @hfuchs5