Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

checkpoint files are geneareted by GEOSldas #182

Merged
merged 4 commits into from
Apr 22, 2020
Merged

checkpoint files are geneareted by GEOSldas #182

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
4faf62c
checkpoint files are geneareted by GEOSldas ( not MAPL) for cubed-sph…
weiyuan-jiang Apr 21, 2020
ac0aab1
create directory for ldas_ObsFcstAna
weiyuan-jiang Apr 21, 2020
d174fcd
change system to standard Execute_command_line
weiyuan-jiang Apr 22, 2020
5441d5b
added comment to bug fix for LANDPERT checkpoint
gmao-rreichle Apr 22, 2020
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 3 additions & 1 deletion src/Applications/LDAS_App/ldas_setup
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -1180,7 +1180,9 @@ class LDASsetup:
valn = self.catch+ensid+'_internal_checkpoint'
ldasrcInp[keyn]= valn

if((self.has_ldassa_pert or self.has_geos_pert) and _perturb == 1):
# for lat/lon and EASE tile space, specify LANDPERT checkpoint file here (via MAPL);
# for cube-sphere tile space, Landpert GC will set up LANDPERT checkpoint file
if('-CF' not in self.rqdExeInp['GRIDNAME'] and _perturb == 1):
keyn = 'LANDPERT_INTERNAL_CHECKPOINT_FILE'
valn = 'landpert'+ensid+'_internal_checkpoint'
ldasrcInp[keyn]= valn
Expand Down
5 changes: 4 additions & 1 deletion src/Components/GEOSldas_GridComp/GEOSlandassim_GridComp/clsm_ensupd_enkf_update.F90
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -1416,7 +1416,7 @@ subroutine output_ObsFcstAna(date_time, work_path, exp_id, &
integer, dimension(numprocs) :: N_obsl_vec, tmp_low_ind

character(300) :: fname

integer :: i
#ifdef LDAS_MPI

integer :: this_species, ind_tmp, j
Expand Down Expand Up @@ -1559,7 +1559,10 @@ subroutine output_ObsFcstAna(date_time, work_path, exp_id, &

fname = get_io_filename( work_path, exp_id, file_tag, date_time=date_time, &
dir_name=dir_name, ens_id=-1 )
i = index(fname, '/', .true.)

if( i >0) call Execute_command_line('mkdir -p '//fname(1:i))

open( 10, file=fname, form='unformatted', action='write')

! write header
Expand Down
18 changes: 9 additions & 9 deletions src/Components/GEOSldas_GridComp/GEOSlandassim_GridComp/clsm_ensupd_read_obs.F90
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -524,7 +524,7 @@ subroutine read_obs_ae_l2_sm( &

cmd = '/bin/rm -f ' // tmpfname

call system(trim(cmd))
call Execute_command_line(trim(cmd))

! identify all files within current assimilation interval
! (list all files within hourly intervals)
Expand Down Expand Up @@ -554,7 +554,7 @@ subroutine read_obs_ae_l2_sm( &

cmd = trim(cmd) // ' >> ' // trim(tmpfname)

call system(trim(cmd))
call Execute_command_line(trim(cmd))

call augment_date_time( 3600, date_time_tmp )

Expand All @@ -566,7 +566,7 @@ subroutine read_obs_ae_l2_sm( &

cmd = 'wc -w ' // trim(tmpfname) // ' > ' // trim(tmpfname2)

call system(trim(cmd))
call Execute_command_line(trim(cmd))

open(10, file=tmpfname2, form='formatted', action='read')

Expand Down Expand Up @@ -1037,7 +1037,7 @@ subroutine read_obs_ae_sm_LPRM( &

cmd = '/bin/rm -f ' // tmpfname

call system(trim(cmd))
call Execute_command_line(trim(cmd))

! identify all files within current assimilation interval
! (list all files within hourly intervals)
Expand Down Expand Up @@ -1070,7 +1070,7 @@ subroutine read_obs_ae_sm_LPRM( &

cmd = trim(cmd) // ' >> ' // trim(tmpfname)

call system(trim(cmd))
call Execute_command_line(trim(cmd))

call augment_date_time( 3600, date_time_tmp )

Expand All @@ -1082,7 +1082,7 @@ subroutine read_obs_ae_sm_LPRM( &

cmd = 'wc -w ' // trim(tmpfname) // ' > ' // trim(tmpfname2)

call system(trim(cmd))
call Execute_command_line(trim(cmd))

open(10, file=tmpfname2, form='formatted', action='read')

Expand Down Expand Up @@ -1348,7 +1348,7 @@ subroutine read_obs_sm_ASCAT( &

cmd = '/bin/rm -f ' // tmpfname

call system(trim(cmd))
call Execute_command_line(trim(cmd))

! identify all files within current assimilation interval
! (list all files within hourly intervals)
Expand Down Expand Up @@ -1379,7 +1379,7 @@ subroutine read_obs_sm_ASCAT( &

cmd = trim(cmd) // ' >> ' // trim(tmpfname)

call system(trim(cmd))
call Execute_command_line(trim(cmd))


call augment_date_time( 3600, date_time_tmp )
Expand All @@ -1392,7 +1392,7 @@ subroutine read_obs_sm_ASCAT( &

cmd = 'wc -w ' // trim(tmpfname) // ' > ' // trim(tmpfname2)

call system(trim(cmd))
call Execute_command_line(trim(cmd))

open(10, file=tmpfname2, form='formatted', action='read')

Expand Down
2 changes: 1 addition & 1 deletion src/Components/GEOSldas_GridComp/Shared/LDAS_TileCoordRoutines.F90
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -475,7 +475,7 @@ subroutine LDAS_read_land_tile( tile_file,catch_file, tile_grid_g, tile_coord_la

i=index(catch_file,'/clsm/')
fname = catch_file(1:i)//'topo_DYN_ave_*.data'
call system('ls '//trim(fname) // ' >topo_DYN_ave.file')
call Execute_command_line('ls '//trim(fname) // ' >topo_DYN_ave.file')
open(10,file='topo_DYN_ave.file', action='read')
fname= ''
read(10,'(A)') fname
Expand Down