2.3.1
2.3.1 Official Release
Many bug fixes and some minor enhancements. Many thanks to the community for reporting, testing, and fixing these issues.
https://github.com/GMOD/Apollo/blob/master/ChangeLog.md#231
To test in Docker:
docker run -it -p 8888:8080 quay.io/gmod/docker-apollo:2.3.0 -v /path/to/jbrowse/directories:/data/
Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/
Note: You can find a guide upgrading existing Apollo installations here:
https://genomearchitect.readthedocs.io/en/latest/Migration.html
Please open a GitHub issue if you find any problems: https://github.com/GMOD/Apollo/issues/
Active mailing list (apollo@lists.lbl.gov) and archive.
Bug Fixes
- Fixed issue when dragging features to resize was not providing an indicator box 1988
- Fixed issue when sequence alterations were not rendering the full height of the sequence track 2049
- Making organisms obsolete should remove associated permissions 2043
- User-created features taken from split reads should create features with introns 2036
- Should indicate split reads properly in evidence 20342054
- Temporary files not removed during export of GFF3 or other file types 1966
- Fixed issue where you could not alter an isoform after deleting a gene name 1961
- Fixed some minor issues associated with sequence alterations 1497
- Multiple owners tagged on GFF3 export 29
- Setting gene description puts UcA into a bad state 2056
- Fixes plugin inclusion error by reverting prior fix 2055
Minor Features