-
Notifications
You must be signed in to change notification settings - Fork 36
/
MANIFEST
121 lines (121 loc) · 3.14 KB
/
MANIFEST
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
bin/process_gadfly.PLS
bin/process_ncbi_human.PLS
bin/process_sgd.PLS
bin/process_wormbase.PLS
cgi_install.pl
ChangeLog
conf/01.yeast.conf
conf/02.wormbase.conf
conf/03.fly.conf
conf/04.human.conf
conf/05.embl.conf
conf/06.biosql.conf
conf/07.chado.conf
conf/enzymes.txt
conf_install.pl
conf/languages/en.pm
conf/languages/es.pm
conf/languages/fr.pm
conf/languages/it.pm
conf/languages/ja.pm
conf/languages/ko.pm
conf/languages/nl.pm
conf/languages/POSIX.pm
conf/languages/zh.pm
conf/plugins/BatchDumper.pm
conf/plugins/FastaDumper.pm
conf/plugins/GFFDumper.pm
conf/plugins/OligoFinder.pm
conf/plugins/RestrictionAnnotator.pm
conf/plugins/SequenceDumper.pm
conf/plugins/test.pm
contrib/bulk_load_gff_win.pl
contrib/Coverage/INSTALL
contrib/Coverage/plugin/Coverage.pm
contrib/Coverage/README
DISCLAIMER
docs/CONFIGURE_HOWTO.txt
docs/MAKE_IMAGES_HOWTO.txt
docs/ORACLE_AND_BIOSQL.txt
docs/README-gff-files
extras/README
gbrowse_img.PLS
gbrowse.PLS
History
htdocs/annotation_help.html
htdocs/gbrowse.css
htdocs/general_help.html
htdocs/general_help.html.zh
htdocs/images/buttons/green1.gif
htdocs/images/buttons/green2.gif
htdocs/images/buttons/green3.gif
htdocs/images/buttons/green4.gif
htdocs/images/buttons/green5.gif
htdocs/images/buttons/green6.gif
htdocs/images/buttons/green7.gif
htdocs/images/buttons/green8.gif
htdocs/images/buttons/green.gif
htdocs/images/buttons/green_l1.gif
htdocs/images/buttons/green_l2.gif
htdocs/images/buttons/green_r1.gif
htdocs/images/buttons/green_r2.gif
htdocs/images/buttons/minus.gif
htdocs/images/buttons/plus.gif
htdocs/images/buttons/red1.gif
htdocs/images/buttons/red2.gif
htdocs/images/buttons/red3.gif
htdocs/images/buttons/red4.gif
htdocs/images/buttons/red5.gif
htdocs/images/buttons/red6.gif
htdocs/images/buttons/red7.gif
htdocs/images/buttons/red8.gif
htdocs/images/buttons/red.gif
htdocs/images/help/detail.gif
htdocs/images/help/detail_scale.gif
htdocs/images/help/landmark.gif
htdocs/images/help/navbar.gif
htdocs/images/help/overview+detail.gif
htdocs/images/help/overview.gif
htdocs/images/help/search+settings.gif
htdocs/images/help/track+settings.gif
htdocs/images/help/upload+edit.gif
htdocs/images/help/upload.gif
htdocs/images/help/upload+remote.gif
htdocs_install.pl
INSTALL
lib/Bio/DB/Das/BioSQL.pm
lib/Bio/DB/Das/BioSQL/Segment/Feature.pm
lib/Bio/DB/Das/BioSQL/Segment.pm
lib/Bio/DB/Das/Chado.pm
lib/Bio/DB/Das/Chado/Segment/Feature.pm
lib/Bio/DB/Das/Chado/Segment.pm
lib/Bio/DB/Das/sql.notes
lib/Bio/DB/Gadfly/Adaptor.pm
lib/Bio/DB/Gadfly/Segment.pm
lib/Bio/DB/GFF/Aggregator/coding.pm
lib/Bio/DB/GFF/Aggregator/orf.pm
lib/Bio/DB/GFF/Aggregator/reftranscript.pm
lib/Bio/DB/GFF/Aggregator/waba_alignment.pm
lib/Bio/DB/GFF/Aggregator/wormbase_gene.pm
lib/Bio/Graphics/Browser/I18n.pm
lib/Bio/Graphics/Browser/Markup.pm
lib/Bio/Graphics/Browser/Plugin.pm
lib/Bio/Graphics/Browser.pm
lib/Bio/Graphics/Glyph/drosophila_arrow.pm
lib/Bio/Graphics/Glyph/phased_exons.pm
lib/Bio/Graphics/Glyph/wormbase_transcript.pm
lib/Bio/Graphics/Glyph/xyplot.pm
lib/WebReports/Browser.pm
make_clean_add.pl
Makefile.PL
MANIFEST
README
README-1.02
README-berkeley-gadfly
README-BioGraphics
README-PLUGINS
README-windows.txt
sample_data/yeast_data.gff
t/01yeast.t
TODO
t/Test.pm