fix stdin-buffering problem adding bigwig track volvox selenium tests

GMOD · Aug 2, 2012 · 16d8f02 · 16d8f02
1 parent 5716f7c
commit 16d8f02
Showing 1 changed file with 6 additions and 2 deletions.
diff --git a/tests/selenium_tests/volvox_biodb_test.py b/tests/selenium_tests/volvox_biodb_test.py
@@ -14,14 +14,18 @@ def setUp( self ):
         call( "bin/prepare-refseqs.pl --fasta docs/tutorial/data_files/volvox.fa --out sample_data/json/volvox/", shell=True )
         call( "bin/biodb-to-json.pl --conf docs/tutorial/conf_files/volvox.json --out sample_data/json/volvox/", shell=True )
         call( "bin/wig-to-json.pl --out sample_data/json/volvox/ --wig docs/tutorial/data_files/volvox_microarray.wig", shell=True )
+
         # add a definition for the volvox bigwig test track
-        subprocess.Popen( ["bin/add-track-json.pl","sample_data/json/volvox/trackList.json"], stdin=PIPE ).stdin.write("""{
+        addtrack = subprocess.Popen( ["bin/add-track-json.pl","sample_data/json/volvox/trackList.json"], stdin=PIPE );
+        addtrack.stdin.write("""{
          "label": "volvox_microarray.bw",
          "key": "volvox_microarray.bw",
          "urlTemplate": "../../raw/volvox/volvox_microarray.bw",
          "type":       "JBrowse/View/Track/Wiggle",
          "storeClass": "JBrowse/Store/BigWig"
-      }""");
+      }""")
+        addtrack.stdin.close()
+
         call( "bin/generate-names.pl --dir sample_data/json/volvox/", shell=True )
         super( AbstractVolvoxBiodbTest, self ).setUp()