mostly whitespace, etc

src/JBrowse/parse.js

@@ -22,45 +22,45 @@ function parseGBConfig(data){
 
 
     //Process each line
-    for (var i = 0; i < n; i++){
-        if(this.regex.comment.test(this.lines[i])){                     //      #this is a comment
+    for (var i = 0; i < n; i++) {
+        if (this.regex.comment.test(this.lines[i])) {                      //      #this is a comment
             // do nothing, since it's a comment.
-        }else if(this.regex.halfParam.test(this.lines[i])){             //      name = 
-            i = isMultiLine(i); // skips lines, so get where to continue
-        }else if(this.regex.param.test(this.lines[i])){                 //      name = value
-            isParam(i);
-        }else if(this.regex.section.test(this.lines[i])){               //      [section_name]
-            isSection(i);
+        } else if (this.regex.halfParam.test(this.lines[i])) {             //      name = 
+            i = MultiLine(i); // skips lines, so get where to continue
+        } else if (this.regex.param.test(this.lines[i])) {                 //      name = value
+            Param(i);
+        } else if (this.regex.section.test(this.lines[i])) {               //      [section_name]
+            Section(i);
         }
     };
 
 
     return this.value; //Returns the JS object
 }
 
-function isParam(i){
+function Param(i) {
     var match = this.lines[i].match(this.regex.param);
-    if(this.section){
-        if (!isNaN(match[2])){
+    if (this.section) {
+        if (!isNaN(match[2])) {
             match[2] = parseInt(match[2]);
         }
         this.value[this.section][match[1].trim()] = match[2];
-    }else{
-        if (!isNaN(match[2].trim())){
+    } else {
+        if (!isNaN(match[2].trim())) {
             match[2] = parseInt(match[2].trim());
         }
         this.value[match[1].trim()] = match[2].trim();
     }
 }
 
-function isMultiLine (i){
-    line = this.lines; rx = this.regex;
+function MultiLine (i){
+    var line = this.lines; var rx = this.regex;
     var lineNum = i+1;
     var tmpStrVal = '';
     // while (line is defined, not a parameter or function)
     while (typeof line[lineNum] !== 'undefined' && (! ( rx.param.test(line[lineNum]) || rx.section.test(line[lineNum])))){
         //if (line not comment or empty)
-        if (! ( rx.comment.test(line[lineNum]) || rx.emptyLine.test(line[lineNum]) )){
+        if (! ( rx.comment.test(line[lineNum]) || rx.emptyLine.test(line[lineNum]) )) {
             if (tmpStrVal === ''){
                 tmpStrVal += line[lineNum].trim();
             } else {
@@ -70,15 +70,15 @@ function isMultiLine (i){
         lineNum++;
     }
     var match = this.lines[i].match(this.regex.param);
-    if(this.section){
+    if (this.section) {
         this.value[this.section][match[1].trim()] = tmpStrVal;
-    }else{
+    } else {
         this.value[match[1].trim()] = tmpStrVal;
     }
     return lineNum - 1; //The line it should continue at.
 }
 
-function isSection (i){
+function Section (i) {
     var match = this.lines[i].match(this.regex.section);
     this.value[match[1].trim()] = {};
     this.section = match[1].trim();