Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Create method to group bigbed features #1135

Open
cmdcolin opened this issue Jul 23, 2018 · 1 comment
Open

Create method to group bigbed features #1135

cmdcolin opened this issue Jul 23, 2018 · 1 comment
Labels
feature req this adds new functionality to JBrowse 1

Comments

@cmdcolin
Copy link
Contributor

BigBed gene grouping is sort of difficult since there is no gene hierarchy indicating transcript children, so currently BigBed transcripts of the same gene arent loaded into a single gene glyph

Could add custom grouping by name possibly requiring refetch

@cmdcolin cmdcolin added the feature req this adds new functionality to JBrowse 1 label Jul 23, 2018
@rbuels rbuels modified the milestone: 1.15.1 Jul 23, 2018
@cmdcolin
Copy link
Contributor Author

cmdcolin commented Dec 6, 2018

Note that biodalliance kind of has a weird approach where their genes track is semi-collapsed by default (same as jbrowse style collapse, except only on a per-gene basis) and then a "+" button on their track label expands all the transcripts from a gene

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
feature req this adds new functionality to JBrowse 1
Projects
None yet
Development

No branches or pull requests

2 participants