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Viewer and analysis software for two-photon images acquired using ScanImage

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8 Commits
jbm_functions
jbm_functions
 
 
private
private
 
 
LICENSE.md
LICENSE.md
 
 
README.md
README.md
 
 
h_CASpineDetectionGUI3.fig
h_CASpineDetectionGUI3.fig
 
 
h_CASpineDetectionGUI3.m
h_CASpineDetectionGUI3.m
 
 
h_MEIAnalysis3.m
h_MEIAnalysis3.m
 
 
h_addToCurrentGroup3.m
h_addToCurrentGroup3.m
 
 
h_analyzeThreshOutline3.m
h_analyzeThreshOutline3.m
 
 
h_animalStateTrackerGUI3.fig
h_animalStateTrackerGUI3.fig
 
 
h_animalStateTrackerGUI3.m
h_animalStateTrackerGUI3.m
 
 
h_annotationROIQuality3.m
h_annotationROIQuality3.m
 
 
h_autoGetPAROI3.m
h_autoGetPAROI3.m
 
 
h_autoMakeMovie3.m
h_autoMakeMovie3.m
 
 
h_autoPosition3.m
h_autoPosition3.m
 
 
h_autoSetAxesRatio3.m
h_autoSetAxesRatio3.m
 
 
h_cLimitQuality3.m
h_cLimitQuality3.m
 
 
h_calcROIDistToFiducial3.m
h_calcROIDistToFiducial3.m
 
 
h_copyROI3.m
h_copyROI3.m
 
 
h_copyROIImg3.m
h_copyROIImg3.m
 
 
h_doubleClickLoadQCaMImg3.m
h_doubleClickLoadQCaMImg3.m
 
 
h_doubleClickMakeRoi3.m
h_doubleClickMakeRoi3.m
 
 
h_dragBoundaryMark3.m
h_dragBoundaryMark3.m
 
 
h_dragRoi3.m
h_dragRoi3.m
 
 
h_dragRoiText3.m
h_dragRoiText3.m
 
 
h_dragTracingMark3.m
h_dragTracingMark3.m
 
 
h_dragTracingMarkText3.m
h_dragTracingMarkText3.m
 
 
h_dragZoomInBox3.m
h_dragZoomInBox3.m
 
 
h_executeCalcGelAnalysisRoi3.m
h_executeCalcGelAnalysisRoi3.m
 
 
h_executeFrameAnalysisCalc3.m
h_executeFrameAnalysisCalc3.m
 
 
h_executeGroupCalcRoi3.m
h_executeGroupCalcRoi3.m
 
 
h_executecalcQCamRoi3.m
h_executecalcQCamRoi3.m
 
 
h_executecalcRoi3.m
h_executecalcRoi3.m
 
 
h_fileTypeQuality3.m
h_fileTypeQuality3.m
 
 
h_finalizeSpineAssigment3.m
h_finalizeSpineAssigment3.m
 
 
h_frameAnalysisGUI3.fig
h_frameAnalysisGUI3.fig
 
 
h_frameAnalysisGUI3.m
h_frameAnalysisGUI3.m
 
 
h_frameAnalysisGroupCalc3.m
h_frameAnalysisGroupCalc3.m
 
 
h_frameAnalysisGrpPlot3.m
h_frameAnalysisGrpPlot3.m
 
 
h_frameAnalysisPlot3.m
h_frameAnalysisPlot3.m
 
 
h_generateLineProfile3.m
h_generateLineProfile3.m
 
 
h_genericSettingCallback3.m
h_genericSettingCallback3.m
 
 
h_getColor3.m
h_getColor3.m
 
 
h_getCurrendInd3.m
h_getCurrendInd3.m
 
 
h_getCurrentImg3.m
h_getCurrentImg3.m
 
 
h_getCurrentSettings3.m
h_getCurrentSettings3.m
 
 
h_getImprofileOpts.m
h_getImprofileOpts.m
 
 
h_getLimits3.m
h_getLimits3.m
 
 
h_getMaxIntensity3.m
h_getMaxIntensity3.m
 
 
h_getOldImg3.m
h_getOldImg3.m
 
 
h_getROISize3.m
h_getROISize3.m
 
 
h_groupControlGUI3.fig
h_groupControlGUI3.fig
 
 
h_groupControlGUI3.m
h_groupControlGUI3.m
 
 
h_hotKeyControls3.m
h_hotKeyControls3.m
 
 
h_imstack3.fig
h_imstack3.fig
 
 
h_imstack3.m
h_imstack3.m
 
 
h_imstack3CloseFcn.m
h_imstack3CloseFcn.m
 
 
h_imstack3Default.mat
h_imstack3Default.mat
 
 
h_imstack3Loader.m
h_imstack3Loader.m
 
 
h_imstack3ResizingFcn.m
h_imstack3ResizingFcn.m
 
 
h_imstackExistingInd3.m
h_imstackExistingInd3.m
 
 
h_loadAnalyzedRoiData3.m
h_loadAnalyzedRoiData3.m
 
 
h_loadAnnotatedRoiData3.m
h_loadAnnotatedRoiData3.m
 
 
h_loadDefault3.m
h_loadDefault3.m
 
 
h_loadDendriteTracingData3.m
h_loadDendriteTracingData3.m
 
 
h_loadFrameAnalysisROI3.m
h_loadFrameAnalysisROI3.m
 
 
h_loadMEIAnalysis3.m
h_loadMEIAnalysis3.m
 
 
h_loadProteinGelImg3.m
h_loadProteinGelImg3.m
 
 
h_loadQCamAnalysis3.m
h_loadQCamAnalysis3.m
 
 
h_loadQCamImg3.m
h_loadQCamImg3.m
 
 
h_loadRefScoringData3.m
h_loadRefScoringData3.m
 
 
h_loadSelectedROISettings3.m
h_loadSelectedROISettings3.m
 
 
h_makeAnnotationROI3.m
h_makeAnnotationROI3.m
 
 
h_makeBGRoi3.m
h_makeBGRoi3.m
 
 
h_makeFiducialPoint3.m
h_makeFiducialPoint3.m
 
 
h_makeMovieGUI3.fig
h_makeMovieGUI3.fig
 
 
h_makeMovieGUI3.m
h_makeMovieGUI3.m
 
 
h_makeRoi3.m
h_makeRoi3.m
 
 
h_makeTracingMark3.m
h_makeTracingMark3.m
 
 
h_makeZoomInBox3.m
h_makeZoomInBox3.m
 
 
h_newGroup3.m
h_newGroup3.m
 
 
h_openDiffFileInGrp3.m
h_openDiffFileInGrp3.m
 
 
h_openFile3.m
h_openFile3.m
 
 
h_openGroup3.m
h_openGroup3.m
 
 
h_openImage3.m
h_openImage3.m
 
 
h_pasteROI3.m
h_pasteROI3.m
 
 
h_plotGroupFcn3.m
h_plotGroupFcn3.m
 
 
h_proteinGelAnalysisGUI3.fig
h_proteinGelAnalysisGUI3.fig
 
 
h_proteinGelAnalysisGUI3.m
h_proteinGelAnalysisGUI3.m
 
 
h_qCamAnalysisGUI3.fig
h_qCamAnalysisGUI3.fig
 
 
h_qCamAnalysisGUI3.m
h_qCamAnalysisGUI3.m
 
 
h_removeFromCurrentGroup3.m
h_removeFromCurrentGroup3.m
 
 
h_replot3.m
h_replot3.m
 
 
h_resetAnalysisNumber3.m
h_resetAnalysisNumber3.m
 
 
h_resetBLUEValues3.m
h_resetBLUEValues3.m
 
 
h_resetXYLimit3.m
h_resetXYLimit3.m
 
 
h_resetZPos3.m
h_resetZPos3.m
 
 
h_resetZoomBox3.m
h_resetZoomBox3.m
 
 
h_retrieveSynapseAnalysis3.m
h_retrieveSynapseAnalysis3.m
 
 
h_roiControlGUI3.fig
h_roiControlGUI3.fig
 
 

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SI_View

Viewer and analysis software for two-photon images acquired using ScanImage

Add to the Matlab path.

Type h_imstack3.

Have tested for MATLAB2014a, 2019a and 2021a

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Viewer and analysis software for two-photon images acquired using ScanImage

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SI_View Latest
Aug 11, 2022

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